MirGeneDB ID | Mml-Mir-551-P1 |
Family name |
MIR-551 (all species) |
Seed |
CGACCCA |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-551a
|
Paralogues |
Mml-Mir-551-P2
|
Orthologues |
Ami-Mir-551-P1
Bta-Mir-551-P1
Cfa-Mir-551-P1
Cli-Mir-551-P1
Cmi-Mir-551-P1
Cpi-Mir-551-P1
Gja-Mir-551-P1
Hsa-Mir-551-P1
Lch-Mir-551-P1
Loc-Mir-551-P1
Mdo-Mir-551-P1
Pbv-Mir-551-P1
Pma-Mir-551-o1
Sha-Mir-551-P1
Spt-Mir-551-P1
Xla-Mir-551-P1a
Xla-Mir-551-P1b
Xtr-Mir-551-P1
|
Node of Origin (locus) |
Vertebrata
|
Node of Origin (family) |
Vertebrata
|
Genome context (rheMac8_trace) |
chr1: 2516541-2516600 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GCUGCCAGAGGGGACUGCCGGGUGACCCUGGAAAUCCAGAGUGGGUGGGGCCUGUCUGACCAUUUCUAGGCGACCCACUCUUGGUUUCCAGGGUUGCCCUGGAAACCACAGAUGGGGAGG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GCUGCCAGAGGGGACUG- -| UG C GGG GUCUGA
CC GGG ACCCUGGAAAUC AGAGUGGGU GCCU C
GG CCC UGGGACCUUUGG UCUCACCCA CGGA C
GGAGGGGUAGACACCAAA U^ GU U G-- UCUUUA
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Star sequence |
Mml-Mir-551-P1_5p* |
mirBase accession | None |
Sequence |
0- GAAAUCCAGAGUGGGUGGGGCCU -23
Get sequence
|
Mature sequence |
Mml-Mir-551-P1_3p |
mirBase accession | MIMAT0006419 |
Sequence |
39- GCGACCCACUCUUGGUUUCCA -60
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-551a
|