MirGeneDB ID | Mmr-Mir-551-P1 |
Family name |
MIR-551 (all species) |
Species |
Gray mouse lemur (Microcebus murinus) |
MiRBase ID |
|
Paralogues |
Mmr-Mir-551-P2
|
Orthologues |
Ami-Mir-551-P1
Cfa-Mir-551-P1
Cja-Mir-551-P1
Cli-Mir-551-P1
Cmi-Mir-551-P1
Cpi-Mir-551-P1
Eca-Mir-551-P1
Gja-Mir-551-P1
Hsa-Mir-551-P1
Laf-Mir-551-P1
Lch-Mir-551-P1
Loc-Mir-551-P1
Mdo-Mir-551-P1
Mml-Mir-551-P1
Neu-Mir-551-P1
Pab-Mir-551-P1
Pbv-Mir-551-P1
Pma-Mir-551-o1
Sha-Mir-551-P1
Spt-Mir-551-P1
Xla-Mir-551-P1a
Xla-Mir-551-P1b
Xtr-Mir-551-P1
|
Node of Origin (locus) |
Vertebrata
|
Node of Origin (family) |
Vertebrata
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007662.1: 52786410-52786471 [+]
UCSC
Ensembl
|
Seed |
CGACCCA |
Precursor (pre-Mir +30nt flank) |
GCGGCCAGAGGGCACUGCCGGGUGACCCUGGAAAUCCAGGGUGGGUGAGGCCUGUCUCCGACCCUUUCCAGGCGACCCACUCUUGGUUUCCAGGGUUGCCCAGGUGACCGCUGAUGGGGAGA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GCGGCCAGAGGGCACUG- -| UG C GAG GUCUCCG
CC GGG ACCCUGGAAAUC AGGGUGGGU GCCU A
GG CCC UGGGACCUUUGG UCUCACCCA CGGA C
AGAGGGGUAGUCGCCAGU A^ GU U G-- CCUUUCC
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Mmr-Mir-551-P1_5p* |
mirBase accession | None |
Sequence |
0- GAAAUCCAGGGUGGGUGAGGCCU -23
Get sequence
|
Mature sequence |
Mmr-Mir-551-P1_3p |
mirBase accession | None |
Sequence |
41- GCGACCCACUCUUGGUUUCCA -62
Get sequence
|