MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-1306

Family name MIR-1306 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-1306  Ami-Mir-1306  Bta-Mir-1306  Cfa-Mir-1306  Cja-Mir-1306  Cli-Mir-1306  Cmi-Mir-1306  Cpi-Mir-1306  Cpo-Mir-1306  Dno-Mir-1306  Dre-Mir-1306  Eca-Mir-1306  Ete-Mir-1306  Gga-Mir-1306  Gja-Mir-1306  Gmo-Mir-1306  Hsa-Mir-1306  Laf-Mir-1306  Lch-Mir-1306  Loc-Mir-1306  Mal-Mir-1306  Mdo-Mir-1306  Mml-Mir-1306  Mmr-Mir-1306  Mmu-Mir-1306  Mun-Mir-1306  Oan-Mir-1306  Ocu-Mir-1306  Pab-Mir-1306  Pbv-Mir-1306  Rno-Mir-1306  Sha-Mir-1306  Spt-Mir-1306  Sto-Mir-1306  Tgu-Mir-1306  Tni-Mir-1306  Xla-Mir-1306-P1a  Xla-Mir-1306-P1b  Xtr-Mir-1306 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051820.1: 10370917-10370977 [+] UCSC Ensembl
Seed CAGCUCC
Precursor
(pre-Mir +30nt flank)		 
CCACCACUGCCUCCUAGCAAAGAGCCUCCACCAGCUCCCCUGCAAAAGUCCAGUGAUGCAGACGUAAUGGAUGUUGGCUCUGGUGGUGUUGGACAGUCAGAUACCUCUGCUGGGGACAUGU
Get precursor sequence
Structure
        10        20        30         40          50          
CCACCACUGCCUCCUAGCAAAGAGCCUCCA     U  -  U--| AAAA     GUGAUGC 
                              CCAGC CC CC   GC    GUCCA       \
                              GGUUG GG GG   CG    UAGGU       A
UGUACAGGGGUCGUCUCCAUAGACUGACA-     U  U  UCU^ GUUG     AAUGCAG 
 .       110       100         90        80        70
Deep sequencing
CommentMir-1306 is an unusual miRNA as it is derived from the 5'-most coding-exon of the DGCR8 gene. We have reads for the 5p arm which are identical to the 5p arm of Sha-Mir-1306
3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-1306_5p (predicted)
mirBase accessionNone
Sequence 
0- CCAGCUCCCCUGCAAAAGUCCA -22
Get sequence
Star sequence

Neu-Mir-1306_3p* (predicted)
mirBase accessionNone
Sequence 
39- GAUGUUGGCUCUGGUGGUGUUG -61
Get sequence