MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-1306

Family name MIR-1306 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-1306  Ami-Mir-1306  Bta-Mir-1306  Cfa-Mir-1306  Cja-Mir-1306  Cli-Mir-1306  Cmi-Mir-1306  Cpi-Mir-1306  Cpo-Mir-1306  Dno-Mir-1306  Dre-Mir-1306  Eca-Mir-1306  Ete-Mir-1306  Gga-Mir-1306  Gja-Mir-1306  Gmo-Mir-1306  Hsa-Mir-1306  Laf-Mir-1306  Lch-Mir-1306  Loc-Mir-1306  Mdo-Mir-1306  Mml-Mir-1306  Mmr-Mir-1306  Mmu-Mir-1306  Mun-Mir-1306  Neu-Mir-1306  Oan-Mir-1306  Ocu-Mir-1306  Pab-Mir-1306  Pbv-Mir-1306  Rno-Mir-1306  Sha-Mir-1306  Spt-Mir-1306  Sto-Mir-1306  Tgu-Mir-1306  Tni-Mir-1306  Xla-Mir-1306-P1a  Xla-Mir-1306-P1b  Xtr-Mir-1306 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884700.1: 821912-821972 [-] UCSC Ensembl
Seed CACCUCC
Precursor
(pre-Mir +30nt flank)		 
UUUGGCCAAGAUGAGGGCAGAGCACCUCCACCACCUCCCCUGCAAACGUCCAGUGACGCAGAGGUAAUGGACGUUAGCUCUGGUGGUGAUGGAUACACAUACACCCCAGGGGACAGGGAAG
Get precursor sequence
Structure
        10        20             30        40        50          
UUUGGCCAAGAUGAGGGCAGAGCA-----| UC       UCCCCU  A        GUGACGC 
                             CC  CACCACC      GC AACGUCCA       \
                             GG  GUGGUGG      CG UUGCAGGU       A
GAAGGGACAGGGGACCCCACAUACACAUA^ UA       UCU---  A        AAUGGAG 
 .       110       100        90        80           70
Deep sequencing
Go to detailed chart
CommentMir-1306 is an unusual miRNA as it is derived from the 5'-most coding-exon of the DGCR8 gene.
3' NTU Unknown
MotifsUGUG in loop
Tissue expression
- +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-1306_5p
mirBase accessionNone
Sequence 
0- CCACCUCCCCUGCAAACGUCCA -22
Get sequence
Star sequence

Mal-Mir-1306_3p* (predicted)
mirBase accessionNone
Sequence 
39- GACGUUAGCUCUGGUGGUGAUG -61
Get sequence