MirGeneDB 3.0
MirGeneDB ID

Mom-Mir-96-P2x

Family name MIR-96 (all species)
Species Mossy chiton (Mopalia muscosa)
MiRBase ID
Paralogues Mom-Mir-96-P1h  Mom-Mir-96-P1i  Mom-Mir-96-P2y  Mom-Mir-96-P2z  Mom-Mir-96-P3 
Orthologues Aae-Mir-96-P2  Aca-Mir-96-P2  Aga-Mir-96-P2  Agr-Mir-96-P2  Ami-Mir-96-P2  Asu-Mir-96-P2  Ava-Mir-96-o2  Bge-Mir-96-P2  Bta-Mir-96-P2  Cel-Mir-96-P2  Cfa-Mir-96-P2  Cin-Mir-96-P2  Cja-Mir-96-P2  Cli-Mir-96-P2  Cmi-Mir-96-P2  Cpi-Mir-96-P2  Cpo-Mir-96-P2  Cte-Mir-96-P2  Dan-Mir-96-P2  Dlo-Mir-96-P2  Dma-Mir-96-P2-v1  Dme-Mir-96-P2  Dno-Mir-96-P2  Dpu-Mir-96-P2-v1  Dsi-Mir-96-P2  Dya-Mir-96-P2  Eba-Mir-96-P2  Eca-Mir-96-P2  Ete-Mir-96-P2  Gga-Mir-96-P2  Gja-Mir-96-P2  Gpa-Mir-96-P2  Hme-Mir-96-P2  Hru-Mir-96-P2  Hsa-Mir-96-P2  Isc-Mir-96-P2  Laf-Mir-96-P2  Lan-Mir-96-P2  Lch-Mir-96-P2  Lgi-Mir-96-P2  Lhy-Mir-96-P2  Llo-Mir-96-P2-v1  Loc-Mir-96-P2  Mdo-Mir-96-P2  Mml-Mir-96-P2  Mmr-Mir-96-P2  Mmu-Mir-96-P2  Mun-Mir-96-P2  Neu-Mir-96-P2  Npo-Mir-96-P2  Oan-Mir-96-P2  Obi-Mir-96-P2  Ocu-Mir-96-P2  Ofu-Mir-96-P2  Ovu-Mir-96-P2  Pab-Mir-96-P2  Pau-Mir-96-P2  Pbv-Mir-96-P2  Pca-Mir-96-P2  Pdu-Mir-96-P2  Pfl-Mir-96-P2  Pmi-Mir-96-P2  Pve-Mir-96-P2  Rno-Mir-96-P2  Rph-Mir-96-P2  Sha-Mir-96-P2  Sko-Mir-96-P2  Snu-Mir-96-P2  Spt-Mir-96-P2  Spu-Mir-96-P2  Sto-Mir-96-P2  Tca-Mir-96-P2  Tgu-Mir-96-P2  Tur-Mir-96-P2  War-Mir-96-P2  Xtr-Mir-96-P2 
Node of Origin (locus) M. mucosa
Node of Origin (family) Bilateria
Genome context
(GCA_031763545.1_ASM3176354v1_genomic_Mom)		 JARFOD010088722.1: 541-602 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-96-P2x)		 Mir-96-P2x JARFOD010088722.1: 541-602 [-] Ensembl
Mir-96-P3 JARFOD010088722.1: 2197-2256 [-] Ensembl
Seed UUGGCAC
Precursor
(pre-Mir +30nt flank)		 
GAUAAUGGUUUAUAUGGAGUUUUCACUGCUCUUGGCACUGGUAGAAUUCACUGAUUAUUUUACAAAUCUCAGUGGUUCCGCAGUUCCAAACUCUGUGGCCUCCUAGCGACUGAUACCAAUCC
Get precursor sequence
Structure
        10        20          30        40        50        60 
GAUAAUGGUUUAUAUGGAGUUU--|   UGCUC    C   G UA    U      UUAUUU 
                        UCAC     UUGG ACU G  GAAU CACUGA      U
                        GGUG     AACC UGA C  CUUG GUGACU      A
CCUAACCAUAGUCAGCGAUCCUCC^   UCUCA    U   - GC    -      CUAAAC 
120       110       100        90         80         70
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
- +
To
Mature sequence

Mom-Mir-96-P2x_5p
mirBase accessionNone
Sequence 
0- CUUGGCACUGGUAGAAUUCACUGA -24
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Star sequence

Mom-Mir-96-P2x_3p* (predicted)
mirBase accessionNone
Sequence 
40- AGUGGUUCCGCAGUUCCAAACU -62
Get sequence