Mir-433

MirGeneDB ID

Mmu-Mir-433

Family name

MIR-433 (all species)

Species

House mouse (Mus musculus)

MiRBase ID

mmu-mir-433

Paralogues

Orthologues

Bta-Mir-433 Cfa-Mir-433 Cja-Mir-433 Cpo-Mir-433 Dno-Mir-433 Eca-Mir-433 Ete-Mir-433 Hsa-Mir-433 Laf-Mir-433 Mml-Mir-433 Mmr-Mir-433 Ocu-Mir-433 Pab-Mir-433 Rno-Mir-433

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(mm10)

chr12: 109591729-109591802 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-433)

Mir-770 chr12: 109563710-109563765 [+] UCSC Ensembl
Mir-673 chr12: 109572004-109572066 [+] UCSC Ensembl
Mir-493 chr12: 109580243-109580305 [+] UCSC Ensembl
Mir-337-as chr12: 109585813-109585873 [-] UCSC Ensembl
Mir-337 chr12: 109585818-109585871 [+] UCSC Ensembl
Mir-540 chr12: 109586085-109586143 [+] UCSC Ensembl
Mir-431 chr12: 109590459-109590522 [+] UCSC Ensembl
Mir-433 chr12: 109591729-109591802 [+] UCSC Ensembl
Mir-127 chr12: 109592854-109592909 [+] UCSC Ensembl
Mir-434 chr12: 109594527-109594586 [+] UCSC Ensembl
Mir-136-v2 chr12: 109595331-109595386 [+] UCSC Ensembl
Mir-136-v1 chr12: 109595331-109595386 [+] UCSC Ensembl
Mir-370 chr12: 109618270-109618326 [+] UCSC Ensembl

Seed

UCAUGAU

Precursor
(pre-Mir +30nt flank)

GAAGAAGAAGACCCAAUGCCCGGGGAGAAGUACGGUGAGCCUGUCAUUAUUCAGAGAGGCUAGAUCCUCUGUGUUGAGAAGGAUCAUGAUGGGCUCCUCGGUGUUCUCCAGGUAGCGGCACCACACCAUGAAGG

Get precursor sequence

Structure

        10           20        30        40        50        60      
GAAGAAGAAGACCCAAU-  --| GG      GUA   U           U    AGAGAGGCUAGAU 
                  GC  CC  GGAGAA   CGG GAGCCUGUCAU AUUC             C
                  CG  GG  CCUCUU   GCU CUCGGGUAGUA UAGG             C
GGAAGUACCACACCACGG  AU^ A-      GUG   C           C    AAGAGUUGUGUCU 
  130       120       110        100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Br	Br	Ce	Ce	Em	Em	He	Ki	Li	Lu	Ov	Pa	Sk	Sp	Te

Star sequence

Mmu-Mir-433_5p*

mirBase accession

MIMAT0001419

Sequence

0- UACGGUGAGCCUGUCAUUAUUC -22

Get sequence

Proposed targets

microrna.org: MIMAT0001419
TargetScanVert: mmu-miR-433-5p
miRDB: MIMAT0001419

Mature sequence

Mmu-Mir-433_3p

mirBase accession

MIMAT0001420

Sequence

52- AUCAUGAUGGGCUCCUCGGUGU -74

Get sequence

Proposed targets

microrna.org: MIMAT0001420
TargetScanVert: mmu-miR-433-3p
miRDB: MIMAT0001420