Mir-433

MirGeneDB ID

Dno-Mir-433

Family name

MIR-433 (all species)

Species

Nine-banded armadillo (Dasypus novemcinctus)

MiRBase ID

dno-mir-433

Paralogues

Orthologues

Bta-Mir-433 Cfa-Mir-433 Cja-Mir-433 Cpo-Mir-433 Eca-Mir-433 Ete-Mir-433 Hsa-Mir-433 Laf-Mir-433 Mml-Mir-433 Mmr-Mir-433 Mmu-Mir-433 Ocu-Mir-433 Pab-Mir-433 Rno-Mir-433

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(dasNov3)

JH578221: 4095-4168 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-433)

Mir-433 JH578221: 4095-4168 [+] UCSC Ensembl
Mir-127 JH578221: 5211-5266 [+] UCSC Ensembl
Mir-432 JH578221: 6661-6729 [+] UCSC Ensembl
Mir-136-v1 JH578221: 6860-6915 [+] UCSC Ensembl
Mir-136-v2 JH578221: 6860-6915 [+] UCSC Ensembl

Seed

ACGGUGA

Precursor
(pre-Mir +30nt flank)

GAAGAAGCCGAGCCAGCGGCCGGGGAGAAGUACGGUGAGCCUGUCAUUAUUCAGAGAGGCAUGAUCCUCAUCUUUGAGAAGAAUCAUGAUGGGCUCCUCGGUGUUCUCCAGGUAGCGGCGCCACACCAUGAAGG

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Structure

        10           20        30        40        50        60      
GAAGAAGCCGAGCCAGCG---|  GG      GUA   U           U    AGAGAGGCAUGAU 
                     GCC  GGAGAA   CGG GAGCCUGUCAU AUUC             C
                     UGG  CCUCUU   GCU CUCGGGUAGUA UAAG             C
GGAAGUACCACACCGCGGCGA^  A-      GUG   C           C    AAGAGUUUCUACU 
  130       120       110        100        90        80        70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

To

Mature sequence

Dno-Mir-433_5p

mirBase accession

MIMAT0047890

Sequence

0- UACGGUGAGCCUGUCAUUAUUC -22

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Co-mature sequence

Dno-Mir-433_3p

mirBase accession

MIMAT0047891

Sequence

52- AUCAUGAUGGGCUCCUCGGUGU -74

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