MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-136

Family name MIR-136 (all species)
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-136
Paralogues Mmu-Mir-136-v1 
Orthologues Cja-Mir-136  Laf-Mir-136  Pab-Mir-136 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)		 chr12: 109595331-109595386 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-136-v2)		 Mir-770 chr12: 109563710-109563765 [+] UCSC Ensembl
Mir-673 chr12: 109572004-109572066 [+] UCSC Ensembl
Mir-493 chr12: 109580243-109580305 [+] UCSC Ensembl
Mir-337-as chr12: 109585813-109585873 [-] UCSC Ensembl
Mir-337 chr12: 109585818-109585871 [+] UCSC Ensembl
Mir-540 chr12: 109586085-109586143 [+] UCSC Ensembl
Mir-431 chr12: 109590459-109590522 [+] UCSC Ensembl
Mir-433 chr12: 109591729-109591802 [+] UCSC Ensembl
Mir-127 chr12: 109592854-109592909 [+] UCSC Ensembl
Mir-434 chr12: 109594527-109594586 [+] UCSC Ensembl
Mir-136-v2 chr12: 109595331-109595386 [+] UCSC Ensembl
Mir-136-v1 chr12: 109595331-109595386 [+] UCSC Ensembl
Mir-370 chr12: 109618270-109618326 [+] UCSC Ensembl
Variant

Mmu-Mir-136-v2
Seed CUCCAUU
Precursor
(pre-Mir +30nt flank)		 
CUUCAACGGUGUUGGAUGAGCCCUCGGAGGACUCCAUUUGUUUUGAUGAUGGAUUCUUAAGCUCCAUCAUCGUCUCAAAUGAGUCUUCAGAGGGUUCUAUCAUGUCGUCGGUUGGA
Get precursor sequence
Structure
        10          20        30        40        50        
CUUCAACGGUGUUGGAU--|       G        C     UUU         AUUCU 
                   GAGCCCUC GAGGACUC AUUUG   UGAUGAUGG     \
                   CUUGGGAG CUUCUGAG UAAAC   GCUACUACC     U
AGGUUGGCUGCUGUACUAU^       A        -     UCU         UCGAA 
    110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-136-v2_5p
mirBase accessionMIMAT0000148
Sequence 
0- ACUCCAUUUGUUUUGAUGAUGG -22
Get sequence
Proposed targets microrna.org: MIMAT0000148
TargetScanVert: mmu-miR-136-5p
miRDB: MIMAT0000148
Co-mature sequence

Mmu-Mir-136-v2_3p
mirBase accessionMIMAT0004532
Sequence 
35- AUCAUCGUCUCAAAUGAGUCU -56
Get sequence
Proposed targets microrna.org: MIMAT0004532
TargetScanVert: mmu-miR-136-3p
miRDB: MIMAT0004532
Variant

Mmu-Mir-136-v1
Seed CUCCAUU
Precursor
(pre-Mir +30nt flank)		 
CUUCAACGGUGUUGGAUGAGCCCUCGGAGGACUCCAUUUGUUUUGAUGAUGGAUUCUUAAGCUCCAUCAUCGUCUCAAAUGAGUCUUCAGAGGGUUCUAUCAUGUCGUCGGUUGGA
Get precursor sequence
Structure
        10          20        30        40        50        
CUUCAACGGUGUUGGAU--|       G        C     UUU          UUCU 
                   GAGCCCUC GAGGACUC AUUUG   UGAUGAUGGA    \
                   CUUGGGAG CUUCUGAG UAAAC   GCUACUACCU    U
AGGUUGGCUGCUGUACUAU^       A        -     UCU          CGAA 
    110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-136-v1_5p
mirBase accessionMIMAT0000148
Sequence 
0- ACUCCAUUUGUUUUGAUGAUGGA -23
Get sequence
Proposed targets microrna.org: MIMAT0000148
TargetScanVert: mmu-miR-136-5p
miRDB: MIMAT0000148
Co-mature sequence

Mmu-Mir-136-v1_3p
mirBase accessionMIMAT0004532
Sequence 
34- CAUCAUCGUCUCAAAUGAGUCU -56
Get sequence
Proposed targets microrna.org: MIMAT0004532
TargetScanVert: mmu-miR-136-3p
miRDB: MIMAT0004532