MirGeneDB 3.0

MirGeneDB ID

Mmu-Mir-202

Family name MIR-202 (all species)
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-202
Paralogues
Orthologues Aca-Mir-202  Ami-Mir-202  Bta-Mir-202  Cfa-Mir-202  Cja-Mir-202  Cli-Mir-202  Cmi-Mir-202  Cpi-Mir-202  Cpo-Mir-202  Dno-Mir-202  Dre-Mir-202  Ebu-Mir-202  Eca-Mir-202  Ete-Mir-202  Gga-Mir-202  Gja-Mir-202  Gmo-Mir-202  Hsa-Mir-202  Laf-Mir-202  Lch-Mir-202  Loc-Mir-202  Mal-Mir-202  Mml-Mir-202  Mmr-Mir-202  Mun-Mir-202  Neu-Mir-202  Oan-Mir-202  Ocu-Mir-202  Pab-Mir-202  Pbv-Mir-202  Pma-Mir-202-P5  Pma-Mir-202-P6  Rno-Mir-202  Sha-Mir-202  Spt-Mir-202  Sto-Mir-202  Tgu-Mir-202  Tni-Mir-202  Xla-Mir-202-P3  Xla-Mir-202-P4  Xtr-Mir-202-P1  Xtr-Mir-202-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mm10)
chr7: 139957695-139957752 [-] UCSC Ensembl
Seed UCCUAUG
Precursor
(pre-Mir +30nt flank)
GGCCCGCACAUUCUCGCUGGCUGUUCCUUUUUCCUAUGCAUAUACUUCUUUGUGGAUCUGGUCUAAAGAGGUAUAGCGCAUGGGAAGAUGGAGCAGUGAGAUCUUCCCCACCCAAACA
Get precursor sequence
Structure
        10          20        30        40         50        
GGCCCGCACAUUCUCGC-- G        U           A-|          GUGGAU 
                   U GCUGUUCC UUUUCCUAUGC  UAUACUUCUUU      \
                   A UGACGAGG AGAAGGGUACG  AUAUGGAGAAA      C
ACAAACCCACCCCUUCUAG G        U           CG^          UCUGGU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-202_5p

mirBase accessionMIMAT0004546
Sequence
0- UUCCUAUGCAUAUACUUCUUU -21
Get sequence
Proposed targets microrna.org: MIMAT0004546
TargetScanVert: mmu-miR-202-5p
miRDB: MIMAT0004546
Star sequence

Mmu-Mir-202_3p*

mirBase accessionMIMAT0000235
Sequence
36- AGAGGUAUAGCGCAUGGGAAGA -58
Get sequence
Proposed targets microrna.org: MIMAT0000235
TargetScanVert: mmu-miR-202-3p
miRDB: MIMAT0000235