| MirGeneDB ID | Cmi-Mir-202 |
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| Family name |
MIR-202 (all species) |
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| Species |
Australian ghostshark (Callorhinchus milii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aca-Mir-202
Ami-Mir-202
Bta-Mir-202
Cfa-Mir-202
Cja-Mir-202
Cli-Mir-202
Cpi-Mir-202
Cpo-Mir-202
Dno-Mir-202
Dre-Mir-202
Ebu-Mir-202
Eca-Mir-202
Ete-Mir-202
Gga-Mir-202
Gja-Mir-202
Gmo-Mir-202
Hsa-Mir-202
Laf-Mir-202
Lch-Mir-202
Loc-Mir-202
Mal-Mir-202
Mml-Mir-202
Mmr-Mir-202
Mmu-Mir-202
Mun-Mir-202
Neu-Mir-202
Oan-Mir-202
Ocu-Mir-202
Pab-Mir-202
Pbv-Mir-202
Pma-Mir-202-P5
Pma-Mir-202-P6
Rno-Mir-202
Sha-Mir-202
Spt-Mir-202
Sto-Mir-202
Tgu-Mir-202
Tni-Mir-202
Xla-Mir-202-P3
Xla-Mir-202-P4
Xtr-Mir-202-P1
Xtr-Mir-202-P2
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| Node of Origin (locus) |
Vertebrata
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| Node of Origin (family) |
Vertebrata
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Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3) |
KI635857.1: 2828376-2828433 [-]
UCSC
Ensembl
|
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| Seed |
UCCUAUG |
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Precursor
(pre-Mir +30nt flank) |
CAAAAUUGAUCCAUUACUCAUUGUUCCUUUUUCCUAUGCACAUACCUCUUUGAGAAUUAGGUCUAAAGAGGCAUAGGGCAUGGGAAAAUGGGGCAAUUGAGGCUGCAUCUGAUCCUUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CAAAAUUGAUCCAUUAC- - U AC-| A GAGAAU
UC AUUGUUCC UUUUCCUAUGC AU CCUCUUU \
AG UAACGGGG AAAAGGGUACG UA GGAGAAA U
AUUCCUAGUCUACGUCGG U U GGA^ C UCUGGA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Bl |
Br |
Ey |
Gi |
He |
In |
Ki |
Li |
Mu |
Ov |
Pa |
Re |
Sk |
Sp |
Te |
Ut |
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| Mature sequence |
Cmi-Mir-202_5p |
| mirBase accession | None |
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| Sequence |
0- UUCCUAUGCACAUACCUCUUU -21
Get sequence
|
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| Star sequence |
Cmi-Mir-202_3p* |
| mirBase accession | None |
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| Sequence |
36- AGAGGCAUAGGGCAUGGGAAAA -58
Get sequence
|
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