Mir-202

MirGeneDB ID

Aca-Mir-202

Family name

MIR-202 (all species)

Species

Green anole lizard (Anolis carolinensis)

MiRBase ID

aca-mir-202

Paralogues

Orthologues

Ami-Mir-202 Bta-Mir-202 Cfa-Mir-202 Cja-Mir-202 Cli-Mir-202 Cmi-Mir-202 Cpi-Mir-202 Cpo-Mir-202 Dno-Mir-202 Dre-Mir-202 Ebu-Mir-202 Eca-Mir-202 Ete-Mir-202 Gga-Mir-202 Gja-Mir-202 Gmo-Mir-202 Hsa-Mir-202 Laf-Mir-202 Lch-Mir-202 Loc-Mir-202 Mal-Mir-202 Mml-Mir-202 Mmr-Mir-202 Mmu-Mir-202 Mun-Mir-202 Neu-Mir-202 Oan-Mir-202 Ocu-Mir-202 Pab-Mir-202 Pbv-Mir-202 Pma-Mir-202-P5 Pma-Mir-202-P6 Rno-Mir-202 Sha-Mir-202 Spt-Mir-202 Sto-Mir-202 Tgu-Mir-202 Tni-Mir-202 Xla-Mir-202-P3 Xla-Mir-202-P4 Xtr-Mir-202-P1 Xtr-Mir-202-P2

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Vertebrata

Genome context
(anoCar2)

GL343262.1: 426464-426521 [-] UCSC Ensembl

Seed

UCCUAUG

Precursor
(pre-Mir +30nt flank)

UUUUCAUCAAUUUCUGCUCAUUGUUCCUUUUUCCUAUGCAUAUACUUCUUUGAGAAUCUGAUCUAAAGAGGCAUACGGCAUGGGAAAAUGGGGCAAUUGAGGUAUUCCUCCACCAUCC

Get precursor sequence

Structure

        10          20        30        40         50        
UUUUCAUCAAUUUCUGC-  -        U           A-|  A       GAGAAU 
                  UC AUUGUUCC UUUUCCUAUGC  UAU CUUCUUU      \
                  AG UAACGGGG AAAAGGGUACG  AUA GGAGAAA      C
CCUACCACCUCCUUAUGG  U        U           GC^  C       UCUAGU 
      110       100        90        80        70        60