Mir-362-P4

MirGeneDB ID

Mmr-Mir-362-P4

Family name

MIR-362 (all species)

Species

Gray mouse lemur (Microcebus murinus)

MiRBase ID

Paralogues

Mmr-Mir-362-P3a-v1 Mmr-Mir-362-P3b-v1 Mmr-Mir-362-P5 Mmr-Mir-362-P6

Orthologues

Bta-Mir-362-P4 Cfa-Mir-362-P4 Cja-Mir-362-P4 Cpo-Mir-362-P4 Dno-Mir-362-P4 Eca-Mir-362-P4 Ete-Mir-362-P4 Hsa-Mir-362-P4 Laf-Mir-362-P4 Mml-Mir-362-P4 Mmu-Mir-362-P4 Ocu-Mir-362-P4 Pab-Mir-362-P4 Rno-Mir-362-P4

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(GCA_000165445.3_Mmur_3.0_genomic)

CM007693.1: 138618608-138618666 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-362-P4)

Mir-188-P1 CM007693.1: 138605615-138605673 [+] UCSC Ensembl
Mir-188-P2 CM007693.1: 138605984-138606043 [+] UCSC Ensembl
Mir-362-P3a-v1 CM007693.1: 138618071-138618132 [+] UCSC Ensembl
Mir-362-P3a-v2 CM007693.1: 138618071-138618132 [+] UCSC Ensembl
Mir-362-P4 CM007693.1: 138618608-138618666 [+] UCSC Ensembl
Mir-362-P5 CM007693.1: 138619388-138619446 [+] UCSC Ensembl
Mir-362-P3b-v2 CM007693.1: 138619927-138619987 [+] UCSC Ensembl
Mir-362-P3b-v1 CM007693.1: 138619927-138619987 [+] UCSC Ensembl
Mir-188-P3 CM007693.1: 138621731-138621789 [+] UCSC Ensembl
Mir-362-P6 CM007693.1: 138623099-138623157 [+] UCSC Ensembl

Seed

AUCCUUG

Precursor
(pre-Mir +30nt flank)

CCUGAGCCUUCUUGUCUGCUCCCCCUCUCGAAUCCUUGGAACCUAGGUGUGAGUGCUGUUUCAGUGCAACACACCUAUUCAAGGAUUCAAAGAGGCUGAGCCUUGUCUGCAUGUAGAAG

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Structure

        10         20         30        40        50        60 
CCUGAGCCUUCUUGUCU-    CC     C-|          ACC        AG   UGUU 
                  GCUC  CCUCU  GAAUCCUUGGA   UAGGUGUG  UGC    \
                  CGAG  GGAGA  CUUAGGAACUU   AUCCACAC  ACG    U
GAAGAUGUACGUCUGUUC    UC     AA^          ---        A-   UGAC 
       110       100        90        80           70

Deep sequencing

Go to detailed chart

3' NTU

Unknown

Motifs

UG at 5p(-14), CNNC at 3p(+17), UGUG in loop

Tissue expression

Mu	Mu	Mu	Mu	Mu	Mu	Mu	Mu

Mature sequence

Mmr-Mir-362-P4_5p

mirBase accession

None

Sequence

0- AAUCCUUGGAACCUAGGUGUGAGUGC -26

Get sequence

Star sequence

Mmr-Mir-362-P4_3p* (predicted)

mirBase accession

None

Sequence

37- AACACACCUAUUCAAGGAUUCA -59

Get sequence