MirGeneDB ID | Ete-Mir-362-P4 |
Family name |
MIR-362 (all species) |
Seed |
AUGCACC |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
Ete-Mir-362-P1
|
Orthologues |
Bta-Mir-362-P4
Cfa-Mir-362-P4
Cpo-Mir-362-P4
Dno-Mir-362-P4
Hsa-Mir-362-P4
Mml-Mir-362-P4
Mmu-Mir-362-P4
Ocu-Mir-362-P4
Rno-Mir-362-P4
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980365: 3855393-3855450 [-]
UCSC
|
Precursor (pre-Mir +30nt flank) |
CACUGCAGGUGCACUGCACUACUUCUCUCUAAUCCUAUUAUCUGGGUGCUAGUGCUAUCUCAAUGCAAUGCACCCAGGCAAAGAUUCUGAGAGGCACCCCACCCGACUCAACUGGAAA
Get precursor sequence
|
Structure | 10 20 30 40 50
CACUGCAGGUGCACUGCACUACU- U-| CUA AU UAG UAUC
UCUCUC AAUC UU CUGGGUGC UGC \
GGAGAG UUAG AA GACCCACG ACG U
AAAGGUCAACUCAGCCCACCCCAC UC^ A-- CG UA- UAAC
110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Ete-Mir-362-P4_5p* (predicted) |
mirBase accession | None |
Sequence |
0- AAUCCUAUUAUCUGGGUGCUAGUGC -25
Get sequence
|
Mature sequence |
Ete-Mir-362-P4_3p (predicted) |
mirBase accession | None |
Sequence |
36- AAUGCACCCAGGCAAAGAUUCU -58
Get sequence
|