MirGeneDB 3.0
MirGeneDB ID

Mml-Mir-208-P1

Family name MIR-208 (all species)
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-208b
Paralogues Mml-Mir-208-P2 
Orthologues Bta-Mir-208-P1-v1  Cfa-Mir-208-P1-v1  Cja-Mir-208-P1  Cpo-Mir-208-P1-v1  Dno-Mir-208-P1-v1  Dre-Mir-208-P1  Ebu-Mir-208-o1  Eca-Mir-208-P1-v1  Ete-Mir-208-P1a  Ete-Mir-208-P1b  Gmo-Mir-208-P1  Hsa-Mir-208-P1-v1  Laf-Mir-208-P1  Lch-Mir-208-P1  Loc-Mir-208-P1c  Loc-Mir-208-P1d  Loc-Mir-208-P1e  Mal-Mir-208-P1  Mdo-Mir-208-P1  Mmr-Mir-208-P1-v1  Mmu-Mir-208-P1-v1  Mun-Mir-208-P1  Neu-Mir-208-P1  Ocu-Mir-208-P1-v1  Pab-Mir-208-P1  Rno-Mir-208-P1-v1  Sha-Mir-208-P1  Sto-Mir-208-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_003339765.3_Mmul_10_traces)		 CM014342.1: 85459117-85459173 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-208-P1-v1)		 Mir-208-P2 CM014342.1: 85430144-85430200 [-] UCSC Ensembl
Mir-208-P1-v1 CM014342.1: 85459117-85459173 [-] UCSC Ensembl
Mir-208-P1-v2 CM014342.1: 85459117-85459173 [-] UCSC Ensembl
Variant

Mml-Mir-208-P1-v1
Seed UAAGACG
Precursor
(pre-Mir +30nt flank)		 
UUCCGGCCCCACCUCCUUCUCCUCUCAGGGAAGCUUUUUGCUCGAAUUAUGUUUCUGAUCCGAAUAUAAGACGAACAAAAGGUUUGUCUGAGGGCAGAGUGCUUCCGUCUGGGGCAG
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Structure
        10          20        30        40        50        
UUCCGGCCCCACCUCCU--|  C        G          C   AA      UUCUG 
                   UCU CUCUCAGG AAGCUUUUUG UCG  UUAUGU     \
                   AGA GGGAGUCU UUUGGAAAAC AGC  AAUAUA     A
GACGGGGUCUGCCUUCGUG^  C        G          A   AG      AGCCU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-208-P1-v1_5p*
mirBase accessionMIMAT0026845
Sequence 
0- AAGCUUUUUGCUCGAAUUAUGU -22
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Proposed targets TargetScanVert: mml-miR-208b-5p
Mature sequence

Mml-Mir-208-P1-v1_3p
mirBase accessionMIMAT0006239
Sequence 
35- AUAAGACGAACAAAAGGUUUGU -57
Get sequence
Proposed targets TargetScanVert: mml-miR-208b-3p
Variant

Mml-Mir-208-P1-v2
Seed AUAAGAC
Precursor
(pre-Mir +30nt flank)		 
UUCCGGCCCCACCUCCUUCUCCUCUCAGGGAAGCUUUUUGCUCGAAUUAUGUUUCUGAUCCGAAUAUAAGACGAACAAAAGGUUUGUCUGAGGGCAGAGUGCUUCCGUCUGGGGCAG
Get precursor sequence
Structure
        10          20        30        40        50        
UUCCGGCCCCACCUCCU--|  C        G          C   AA       UCUG 
                   UCU CUCUCAGG AAGCUUUUUG UCG  UUAUGUU    \
                   AGA GGGAGUCU UUUGGAAAAC AGC  AAUAUAA    A
GACGGGGUCUGCCUUCGUG^  C        G          A   AG       GCCU 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-208-P1-v2_5p*
mirBase accessionMIMAT0026845
Sequence 
0- AAGCUUUUUGCUCGAAUUAUGUU -23
Get sequence
Proposed targets TargetScanVert: mml-miR-208b-5p
Mature sequence

Mml-Mir-208-P1-v2_3p
mirBase accessionMIMAT0006239
Sequence 
34- UAUAAGACGAACAAAAGGUUUGU -57
Get sequence
Proposed targets TargetScanVert: mml-miR-208b-3p