MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-208-P1a

Family name MIR-208 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-208-P1b  Ete-Mir-208-P2 
Orthologues Bta-Mir-208-P1-v1  Cfa-Mir-208-P1-v1  Cja-Mir-208-P1  Cpo-Mir-208-P1-v1  Dno-Mir-208-P1-v1  Dre-Mir-208-P1  Ebu-Mir-208-o1  Eca-Mir-208-P1-v1  Gmo-Mir-208-P1  Hsa-Mir-208-P1-v1  Laf-Mir-208-P1  Lch-Mir-208-P1  Mal-Mir-208-P1  Mdo-Mir-208-P1  Mml-Mir-208-P1-v1  Mmr-Mir-208-P1-v1  Mmu-Mir-208-P1-v1  Mun-Mir-208-P1  Neu-Mir-208-P1  Ocu-Mir-208-P1-v1  Pab-Mir-208-P1  Rno-Mir-208-P1-v1  Sha-Mir-208-P1  Sto-Mir-208-P1 
Node of Origin (locus) E. telfairi
Node of Origin (family) Vertebrata
Genome context
(echTel2)		 JH980297: 4296372-4296428 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-208-P1a)		 Mir-208-P1b JH980297: 4264916-4264972 [-] UCSC
Mir-208-P1a JH980297: 4296372-4296428 [-] UCSC
Seed UAAGACG
Precursor
(pre-Mir +30nt flank)		 
CCCCGGGCCCACCUCCUUCUCCUCUCAGGAAAGCUUUUUGCUCGCGUUAUGUUUCUCAUCCGAAUAUAAGACGAACAAAAGGUUUGUCUGAGGGCAGAGUGCUCCCACCUGGGCAGA
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Structure
        10          20        30        40        50        
CCCCGGGCCCACCUCCU--|  C       GA          C   CG      UUCUC 
                   UCU CUCUCAG  AAGCUUUUUG UCG  UUAUGU     \
                   AGA GGGAGUC  UUUGGAAAAC AGC  AAUAUA     A
AGACGGGUCCACCCUCGUG^  C       UG          A   AG      AGCCU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Ete-Mir-208-P1a_5p*
mirBase accessionNone
Sequence 
0- AAGCUUUUUGCUCGCGUUAUGU -22
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Mature sequence

Ete-Mir-208-P1a_3p
mirBase accessionNone
Sequence 
35- AUAAGACGAACAAAAGGUUUGU -57
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