MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-208-P1

Family name MIR-208 (all species)
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-208-P2 
Orthologues Bta-Mir-208-P1-v1  Cfa-Mir-208-P1-v1  Cja-Mir-208-P1  Cpo-Mir-208-P1-v1  Dno-Mir-208-P1-v1  Dre-Mir-208-P1  Ebu-Mir-208-o1  Eca-Mir-208-P1-v1  Ete-Mir-208-P1a  Ete-Mir-208-P1b  Gmo-Mir-208-P1  Hsa-Mir-208-P1-v1  Lch-Mir-208-P1  Loc-Mir-208-P1c  Loc-Mir-208-P1d  Loc-Mir-208-P1e  Mal-Mir-208-P1  Mdo-Mir-208-P1  Mml-Mir-208-P1-v1  Mmr-Mir-208-P1-v1  Mmu-Mir-208-P1-v1  Mun-Mir-208-P1  Neu-Mir-208-P1  Ocu-Mir-208-P1-v1  Pab-Mir-208-P1  Rno-Mir-208-P1-v1  Sha-Mir-208-P1  Sto-Mir-208-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010131.1: 2104970-2105026 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-208-P1)		 Mir-208-P2 GL010131.1: 2072686-2072742 [-] UCSC Ensembl
Mir-208-P1 GL010131.1: 2104970-2105026 [-] UCSC Ensembl
Seed UAAGACG
Precursor
(pre-Mir +30nt flank)		 
CCCCGGCCCCACCUCCUUCUCCUCUCAGGGAAGCUUUUUGCUCGCGUUAUGUUUCUCAUCUGAAUAUAAGACGAACAAAAGGUUUGUCUGAGGGCAGAGUGCUCCUGCCUGGGGCAG
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Structure
        10          20        30        40        50        
CCCCGGCCCCACCUCCU--|  C        G          C   CG      UUCUC 
                   UCU CUCUCAGG AAGCUUUUUG UCG  UUAUGU     \
                   AGA GGGAGUCU UUUGGAAAAC AGC  AAUAUA     A
GACGGGGUCCGUCCUCGUG^  C        G          A   AG      AGUCU 
     110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Wh
Star sequence

Laf-Mir-208-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- AAGCUUUUUGCUCGCGUUAUGU -22
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Mature sequence

Laf-Mir-208-P1_3p (predicted)
mirBase accessionNone
Sequence 
35- AUAAGACGAACAAAAGGUUUGU -57
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