MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-208-P1

Family name MIR-208 (all species)
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-208b
Paralogues Mdo-Mir-208-P2 
Orthologues Bta-Mir-208-P1-v1  Cfa-Mir-208-P1-v1  Cja-Mir-208-P1  Cpo-Mir-208-P1-v1  Dno-Mir-208-P1-v1  Dre-Mir-208-P1  Ebu-Mir-208-o1  Eca-Mir-208-P1-v1  Ete-Mir-208-P1a  Ete-Mir-208-P1b  Gmo-Mir-208-P1  Hsa-Mir-208-P1-v1  Laf-Mir-208-P1  Lch-Mir-208-P1  Loc-Mir-208-P1c  Loc-Mir-208-P1d  Loc-Mir-208-P1e  Mal-Mir-208-P1  Mml-Mir-208-P1-v1  Mmr-Mir-208-P1-v1  Mmu-Mir-208-P1-v1  Mun-Mir-208-P1  Neu-Mir-208-P1  Ocu-Mir-208-P1-v1  Pab-Mir-208-P1  Rno-Mir-208-P1-v1  Sha-Mir-208-P1  Sto-Mir-208-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(monDom5_add)		 1: 172843322-172843378 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-208-P1)		 Mir-208-P2 1: 172794240-172794296 [-] UCSC Ensembl
Mir-208-P1 1: 172843322-172843378 [-] UCSC Ensembl
Seed AGCUUUU
Precursor
(pre-Mir +30nt flank)		 
CCCCCACUCCUGCAUCUUCUCCUCUCAGGGAAGCUUUUUGCUCGGGUUAUGUUUUGGAUCUGAAUAUAAGACGAACAAAAGGUUUGUCUGUGUGCAGAGAGUUACAGCAUGUGGCAG
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Structure
        10        20             30        40        50        
CCCCCACUCCUGCAUCUUCUC    -----|   G          C   GG      UUUGG 
                     CUCU     CAGG AAGCUUUUUG UCG  UUAUGU     \
                     GAGA     GUCU UUUGGAAAAC AGC  AAUAUA     A
GACGGUGUACGACAUUGA---    CGUGU^   G          A   AG      AGUCU 
     110       100           90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-208-P1_5p
mirBase accessionMIMAT0028612
Sequence 
0- AAGCUUUUUGCUCGGGUUAUGU -22
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Proposed targets TargetScanVert: mdo-miR-208b-5p
Co-mature sequence

Mdo-Mir-208-P1_3p
mirBase accessionMIMAT0028613
Sequence 
35- AUAAGACGAACAAAAGGUUUGU -57
Get sequence
Proposed targets TargetScanVert: mdo-miR-208b-3p