MirGeneDB 2.1
MirGeneDB ID

Mml-Mir-188-P3

Family name MIR-188 (all species)
Seed ACCCAUU
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-660
Paralogues Mml-Mir-188-P1  Mml-Mir-188-P2 
Orthologues Bta-Mir-188-P3  Cfa-Mir-188-P3  Cpo-Mir-188-P3  Dno-Mir-188-P3  Ete-Mir-188-P3  Hsa-Mir-188-P3  Ocu-Mir-188-P3 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rheMac8_trace)		 chrX: 50020582-50020640 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-188-P3)		 Mir-188-P2 chrX: 50008239-50008297 [+] UCSC Ensembl
Mir-188-P1 chrX: 50008592-50008651 [+] UCSC Ensembl
Mir-362-P2-v1 chrX: 50013506-50013567 [+] UCSC Ensembl
Mir-362-P2-v2 chrX: 50013506-50013567 [+] UCSC Ensembl
Mir-362-P1 chrX: 50014029-50014087 [+] UCSC Ensembl
Mir-362-P5 chrX: 50017286-50017346 [+] UCSC Ensembl
Mir-362-P3 chrX: 50018014-50018073 [+] UCSC Ensembl
Mir-188-P3 chrX: 50020582-50020640 [+] UCSC Ensembl
Mir-362-P4 chrX: 50021934-50021993 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGCAGAAGAAUGAACUGCUCCUUCUCCCAUACCCAUUGCAUAUCGGAGUUGUAAAUUCUCAAAACACCUCCUGUGUGCAUGGAUUACAGGAGGGUGAGCCUUGUCAUCGUGAAUCUUC
Get precursor sequence
Structure
        10          20        30         40        50         
GUGCAGAAGAAUGAACU--    C      CAUAC-|   U      C    U   AAAUU 
                   GCUC UUCUCC      CCAU GCAUAU GGAG UGU     \
                   CGAG GGGAGG      GGUA CGUGUG CCUC ACA     C
CUUCUAAGUGCUACUGUUC    U      ACAUUA^   -      U    C   AAACU 
       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-188-P3_5p
mirBase accessionMIMAT0006499
Sequence 
0- UACCCAUUGCAUAUCGGAGUUGU -23
Get sequence
Proposed targets TargetScanVert: mml-miR-660-5p
Star sequence

Mml-Mir-188-P3_3p*
mirBase accessionMIMAT0026907
Sequence 
36- ACCUCCUGUGUGCAUGGAUUACA -59
Get sequence
Proposed targets TargetScanVert: mml-miR-660-3p