MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-1388

Family name MIR-1388 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-1388  Ami-Mir-1388  Bta-Mir-1388  Cfa-Mir-1388  Cli-Mir-1388  Cmi-Mir-1388  Cpi-Mir-1388  Cpo-Mir-1388  Dno-Mir-1388  Dre-Mir-1388  Eca-Mir-1388  Eca-Mir-1388-as  Ete-Mir-1388  Gga-Mir-1388  Gja-Mir-1388  Gmo-Mir-1388  Laf-Mir-1388  Lch-Mir-1388  Loc-Mir-1388  Mdo-Mir-1388  Mmr-Mir-1388  Mun-Mir-1388  Oan-Mir-1388-v1  Pbv-Mir-1388  Sha-Mir-1388  Spt-Mir-1388  Sto-Mir-1388  Tgu-Mir-1388  Tni-Mir-1388  Xla-Mir-1388-P1  Xla-Mir-1388-P2  Xtr-Mir-1388 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884779.1: 739463-739521 [-] UCSC Ensembl
Seed GGACUGU
Precursor
(pre-Mir +30nt flank)		 
UCCCACAUUAACUCUUGAGUAGUUCUUUCUAGGACUGUCCAACCUGAGAAUGUUGAUGUCAGGCUCAAUCUCAGGUUCGUCAGCCCAUGAAACGCUAACUCACCUCAGCAAAUUAUGAA
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Structure
        10           20        30        40        50         
UCCCACAUUAACUCUUGAG---|   UC    UA  A   UCC         A  UUGAUG 
                      UAGU  UUUC  GG CUG   AACCUGAGA UG      \
                      AUCG  AAAG  CC GAC   UUGGACUCU AC      U
AAGUAUUAAACGACUCCACUCA^   C-    UA  C   UGC         A  UCGGAC 
       110       100         90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-1388_5p
mirBase accessionNone
Sequence 
0- AGGACUGUCCAACCUGAGAAUG -22
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Star sequence

Mal-Mir-1388_3p*
mirBase accessionNone
Sequence 
37- AUCUCAGGUUCGUCAGCCCAUG -59
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