MirGeneDB 2.1
MirGeneDB ID

Mal-Let-7-P2b4a

Family name LET-7 (all species)
Seed GAGGUAG
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Let-7-P1b1  Mal-Let-7-P1b2  Mal-Let-7-P1c2  Mal-Let-7-P1d1  Mal-Let-7-P1d2  Mal-Let-7-P2a1a  Mal-Let-7-P2a2a  Mal-Let-7-P2a2b  Mal-Let-7-P2a3a  Mal-Let-7-P2a3b  Mal-Let-7-P2a4a  Mal-Let-7-P2a4b  Mal-Let-7-P2b1a  Mal-Let-7-P2b2a  Mal-Let-7-P2b2b  Mal-Let-7-P2b3a  Mal-Let-7-P2b4b  Mal-Let-7-P2c2b  Mal-Let-7-P2c3 
Orthologues Aae-Let-7  Aca-Let-7-P2b4  Ami-Let-7-P2b4  Bge-Let-7  Bpl-Let-7  Cgi-Let-7  Cli-Let-7-P2b4  Cmi-Let-7-P2b4  Cpi-Let-7-P2b4  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dre-Let-7-P2b4a  Dre-Let-7-P2b4b  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Gga-Let-7-P2b4  Gja-Let-7-P2b4  Gmo-Let-7-P2b4a  Gmo-Let-7-P2b4b  Hme-Let-7  Isc-Let-7  Lan-Let-7  Lch-Let-7-P2b4  Lgi-Let-7  Loc-Let-7-P2b4  Mun-Let-7-P2b4  Npo-Let-7  Oan-Let-7-P2b4  Obi-Let-7  Ovu-Let-7  Pbv-Let-7-P2b4  Pfl-Let-7  Pmi-Let-7  Sko-Let-7  Spt-Let-7-P2b4  Spu-Let-7  Tca-Let-7  Tgu-Let-7-P2b4  Tni-Let-7-P2b4a  Tni-Let-7-P2b4b  Xbo-Let-7 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884694.1: 1086043-1086119 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGGUGUGUUUGAUUUGGGCUCUGUCAGGGUGAGGUAGUAGGUUGUAUAGUUUGGUGGGUGGGAUUGCACCCUGCUCAGGUGAUAACUAUACAGUCUAUUGCCUUCCUUGAGGAGCUCACUGAACAUUCAGUGAUAU
Get precursor sequence
Structure
        10           20        30        40        50        60        
GUGGUGUGUUUGAUUUG---|     G      U          GU         UGGUGGGUGGGAUUG 
                    GGCUCU UCAGGG GAGGUAGUAG  UGUAUAGUU               C
                    UCGAGG AGUUCC UUCCGUUAUC  ACAUAUCAA               A
UAUAGUGACUUACAAGUCAC^     -      -          UG         UAGUGGACUCGUCCC 
     130       120        110        100        90        80        70
Deep sequencing
Go to detailed chart
CommentAlthough there is a templated T at the 3' end of the 3p arm, the post-transcriptional addition of a terminal 3' U is supported by the conservation of Let7-P2 processing.
3' NTU Yes
MotifsNo
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Let-7-P2b4a_5p
mirBase accessionNone
Sequence 
0- UGAGGUAGUAGGUUGUAUAGUU -22
Get sequence
Star sequence

Mal-Let-7-P2b4a_3p*
mirBase accessionNone
Sequence 
56- CUAUACAGUCUAUUGCCUUCC -77
Get sequence