MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-10-P2o

Family name MIR-10 (all species)
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-10-P1k-v1  Lpo-Mir-10-P1l-v1  Lpo-Mir-10-P1m-v1  Lpo-Mir-10-P1n-v1  Lpo-Mir-10-P1o-v1  Lpo-Mir-10-P1p-v1  Lpo-Mir-10-P2p  Lpo-Mir-10-P2q  Lpo-Mir-10-P3o  Lpo-Mir-10-P3p  Lpo-Mir-10-P3q  Lpo-Mir-10-P4j  Lpo-Mir-10-P4k  Lpo-Mir-10-P4l  Lpo-Mir-10-P4m  Lpo-Mir-10-P4n 
Orthologues Aae-Mir-10-P2  Adi-Mir-10  Aga-Mir-10-P2  Agr-Mir-10-P2  Asp-Mir-10  Asu-Mir-10-P2o3  Asu-Mir-10-P2o4  Asu-Mir-10-P2o5  Asu-Mir-10-P2o6  Asu-Mir-10-P2o7  Asu-Mir-10-P2o8  Bfl-Mir-10-P2-v1  Bge-Mir-10-P2  Bko-Mir-10-P2  Bla-Mir-10-P2-v1  Bpl-Mir-10-P2  Cbr-Mir-10-P2  Cel-Mir-10-P2  Cin-Mir-10-P2  Cte-Mir-10-P2  Dan-Mir-10-P2  Dgr-Mir-10-P2  Dlo-Mir-10-P2  Dma-Mir-10-P2  Dme-Mir-10-P2  Dmo-Mir-10-P2  Dpu-Mir-10-P2  Dsi-Mir-10-P2  Dya-Mir-10-P2  Eba-Mir-10-P2  Gpa-Mir-10-P2  Gsp-Mir-10-P2  Hru-Mir-10-P2  Isc-Mir-10-P2  Lan-Mir-10-P2  Lgi-Mir-10-P2  Lhy-Mir-10-P2  Llo-Mir-10-P2  Mgi-Mir-10-P2  Mom-Mir-10-P2  Npo-Mir-10-P2  Nve-Mir-10  Obi-Mir-10-P2  Ofu-Mir-10-P2  Ovu-Mir-10-P2  Pau-Mir-10-P2  Pca-Mir-10-P2  Pdu-Mir-10-P2  Pfl-Mir-10-P2  Ple-Mir-10-P2  Pma-Mir-10-P2o1  Pma-Mir-10-P2o2  Pmi-Mir-10-P2  Pve-Mir-10-P2  Rph-Mir-10-P2  Sko-Mir-10-P2  Snu-Mir-10-P2  Tca-Mir-10-P2  Tur-Mir-10-P2  Xbo-Mir-10-P2  Xbo-Mir-10-P2-as 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Eumetazoa
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013668056.1: 167700-167760 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-10-P2o)		 Mir-10-P2o NW_013668056.1: 167700-167760 [+] Ensembl
Let-7-P15 NW_013668056.1: 170127-170193 [+] Ensembl
Mir-10-P3o NW_013668056.1: 175514-175570 [+] Ensembl
Seed ACCCGUA
Precursor
(pre-Mir +30nt flank)		 
GCCCGACGACGAAGUUUACCUUGCCGCCUGAACCCGUAGAAUCGGAUUUGUGUUCUUUCUUCGCAACCACAAGCUCGUUUCUAAGGGUCUAGGCUGUGUGGGGGUCGGCACUGAAAGUAUU
Get precursor sequence
Structure
        10        20          30        40        50          
GCCCGACGACGAAGUUUA   UG - -|    A    G     U  GA      UUCUUUC 
                  CCU  C C GCCUG ACCC UAGAA CG  UUUGUG       \
                  GGG  G G CGGAU UGGG AUCUU GC  GAACAC       U
UUAUGAAAGUCACGGCUG   GU U U^    C    A     U  UC      CAACGCU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ge Ge So So So To
Mature sequence

Lpo-Mir-10-P2o_5p
mirBase accessionNone
Sequence 
0- AACCCGUAGAAUCGGAUUUGUG -22
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Star sequence

Lpo-Mir-10-P2o_3p*
mirBase accessionNone
Sequence 
39- CAAGCUCGUUUCUAAGGGUCUA -61
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