MirGeneDB 2.1
MirGeneDB ID

Lpo-Mir-10-P2q

Family name MIR-10 (all species)
Seed ACCCGUA
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-10-P1k-v1  Lpo-Mir-10-P1k-v2  Lpo-Mir-10-P1l-v1  Lpo-Mir-10-P1l-v2  Lpo-Mir-10-P1m-v1  Lpo-Mir-10-P1m-v2  Lpo-Mir-10-P1n-v1  Lpo-Mir-10-P1n-v2  Lpo-Mir-10-P1o-v1  Lpo-Mir-10-P1o-v2  Lpo-Mir-10-P1p-v1  Lpo-Mir-10-P1p-v2  Lpo-Mir-10-P2o  Lpo-Mir-10-P2p  Lpo-Mir-10-P3o  Lpo-Mir-10-P3p  Lpo-Mir-10-P3q  Lpo-Mir-10-P4j  Lpo-Mir-10-P4k  Lpo-Mir-10-P4l  Lpo-Mir-10-P4m  Lpo-Mir-10-P4n 
Orthologues Aae-Mir-10-P2  Bfl-Mir-10-P2-v1  Bfl-Mir-10-P2-v2  Bge-Mir-10-P2  Bla-Mir-10-P2-v1  Bla-Mir-10-P2-v2  Bpl-Mir-10-P2  Cbr-Mir-10-P2  Cel-Mir-10-P2  Cgi-Mir-10-P2  Cin-Mir-10-P2  Cte-Mir-10-P2  Dan-Mir-10-P2  Dma-Mir-10-P2  Dme-Mir-10-P2  Dmo-Mir-10-P2  Dpu-Mir-10-P2  Dsi-Mir-10-P2  Dya-Mir-10-P2  Isc-Mir-10-P2  Lan-Mir-10-P2  Lgi-Mir-10-P2  Npo-Mir-10-P2  Nve-Mir-10  Obi-Mir-10-P2  Ovu-Mir-10-P2  Pfl-Mir-10-P2  Pmi-Mir-10-P2  Sko-Mir-10-P2  Tca-Mir-10-P2  Xbo-Mir-10-P2  Xbo-Mir-10-P2-as 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Eumetazoa
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013667555.1: 88689-88749 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCCUGAGGGCGAAGUUCACCCUGCCGCCUAAACCCGUAGAAUCGAACUUGUGUUCUAGUACUGACGUCACAAGCUCGUUUGUAUGGGCCUAGGCUGUGAUGGUGGUGUGCAGCGGCGACAA
Get precursor sequence
Structure
        10         20         30        40        50          
GCCUGAGGGCGAAGUUC-   CU-| C     AA      G  U   A      UUCUAGU 
                  ACC   GC GCCUA  CCCGUA AA CGA CUUGUG       \
                  UGG   UG CGGAU  GGGUAU UU GCU GAACAC       A
AACAGCGGCGACGUGUGG   UAG^ U     CC      G  U   C      UGCAGUC 
 .       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Mature sequence

Lpo-Mir-10-P2q_5p
mirBase accessionNone
Sequence 
0- AACCCGUAGAAUCGAACUUGUG -22
Get sequence
Star sequence

Lpo-Mir-10-P2q_3p*
mirBase accessionNone
Sequence 
39- CAAGCUCGUUUGUAUGGGCCUA -61
Get sequence