MirGeneDB 3.0
MirGeneDB ID

Hme-Mir-305

Family name MIR-305 (all species)
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-305
Paralogues
Orthologues Aae-Mir-305  Aga-Mir-305  Asu-Mir-305  Bge-Mir-305  Cbr-Mir-305-P1  Cbr-Mir-305-P2  Cbr-Mir-305-P3  Cel-Mir-305-P1  Cel-Mir-305-P2  Csc-Mir-305  Dan-Mir-305  Dlo-Mir-305  Dma-Mir-305  Dme-Mir-305  Dmo-Mir-305  Dpu-Mir-305  Dsi-Mir-305  Dya-Mir-305  Gpa-Mir-305  Isc-Mir-305  Lpo-Mir-305-P4  Lpo-Mir-305-P5  Lpo-Mir-305-P6  Lpo-Mir-305-P7  Lpo-Mir-305-P8  Tca-Mir-305  Tur-Mir-305 
Node of Origin (locus) Cryptovermes
Node of Origin (family) Cryptovermes
Genome context
(Hmel_1)		 HE669248: 31865-31924 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-305)		 Mir-275 HE669248: 31749-31804 [+] Ensembl
Mir-305 HE669248: 31865-31924 [+] Ensembl
Seed UUGUACU
Precursor
(pre-Mir +30nt flank)		 
CGUGGGGGAGCAUGGUGCCGCCGCACGCCCAUUGUACUUCAUCAGGUGCUCUGGUGAUAAUGGUUCCAGGCGCUUGUUGGAGUACACUUACCGUGUCGGCGGUUUUCGUCGGAAGGCACU
Get precursor sequence
Structure
        10         20         30        40        50          
CGUGGGGGAGCAUGGUG-      -|   CCCAU         U       U    UGAUA 
                  CCGCCG CACG     UGUACUUCA CAGGUGC CUGG     \
                  GGCGGC GUGC     ACAUGAGGU GUUCGCG GACC     A
UCACGGAAGGCUGCUUUU      U^   CAUUC         U       -    UUGGU 
.       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Fe Fe Fe Fe Ma Ma
Mature sequence

Hme-Mir-305_5p
mirBase accessionMIMAT0024974
Sequence 
0- AUUGUACUUCAUCAGGUGCUCUGG -24
Get sequence
Star sequence

Hme-Mir-305_3p*
mirBase accessionNone
Sequence 
37- AGGCGCUUGUUGGAGUACACUUA -60
Get sequence