MirGeneDB 3.0
MirGeneDB ID

Dsi-Mir-305

Family name MIR-305 (all species)
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-305
Paralogues
Orthologues Aae-Mir-305  Aga-Mir-305  Asu-Mir-305  Bge-Mir-305  Cbr-Mir-305-P1  Cbr-Mir-305-P2  Cbr-Mir-305-P3  Cel-Mir-305-P1  Cel-Mir-305-P2  Csc-Mir-305  Dan-Mir-305  Dlo-Mir-305  Dma-Mir-305  Dme-Mir-305  Dmo-Mir-305  Dpu-Mir-305  Dya-Mir-305  Gpa-Mir-305  Hme-Mir-305  Isc-Mir-305  Lpo-Mir-305-P4  Lpo-Mir-305-P5  Lpo-Mir-305-P6  Lpo-Mir-305-P7  Lpo-Mir-305-P8  Tca-Mir-305  Tur-Mir-305 
Node of Origin (locus) Cryptovermes
Node of Origin (family) Cryptovermes
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 2L: 7179853-7179913 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-305)		 Mir-275 2L: 7179688-7179749 [+] UCSC Ensembl
Mir-305 2L: 7179853-7179913 [+] UCSC Ensembl
Seed UUGUACU
Precursor
(pre-Mir +30nt flank)		 
UCCCAUGUGUAUCAACUGUCUCCCAUGUCUAUUGUACUUCAUCAGGUGCUCUGGUGUGUCUCGUAACCCGGCACAUGUUGAAGUACACUCAAUAUGAGGCGAUUUGCAUACGAAAGCGACC
Get precursor sequence
Structure
        10         20         30        40        50        60
UCCCAUGUGUAUCAACU-   U  -|    CUAU         U  G     CU  UGUGU 
                  GUC CC CAUGU    UGUACUUCA CA GUGCU  GG     C
                  UAG GG GUAUA    ACAUGAAGU GU CACGG  CC     U
CCAGCGAAAGCAUACGUU   C  A^    ACUC         U  A     C-  AAUGC 
 .       110       100        90        80        70
Deep sequencing
Go to detailed chart
CommentThere are several snps between the mirbase entry and this entry.
3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
- +
He Wh
Mature sequence

Dsi-Mir-305_5p
mirBase accessionMIMAT0008860
Sequence 
0- AUUGUACUUCAUCAGGUGCUCUGG -24
Get sequence
Star sequence

Dsi-Mir-305_3p*
mirBase accessionNone
Sequence 
38- CGGCACAUGUUGAAGUACACUCA -61
Get sequence