MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-305

Family name MIR-305 (all species)
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues
Orthologues Aae-Mir-305  Aga-Mir-305  Asu-Mir-305  Bge-Mir-305  Cbr-Mir-305-P1  Cbr-Mir-305-P2  Cbr-Mir-305-P3  Cel-Mir-305-P1  Cel-Mir-305-P2  Dan-Mir-305  Dlo-Mir-305  Dma-Mir-305  Dme-Mir-305  Dmo-Mir-305  Dpu-Mir-305  Dsi-Mir-305  Dya-Mir-305  Gpa-Mir-305  Hme-Mir-305  Isc-Mir-305  Lpo-Mir-305-P4  Lpo-Mir-305-P5  Lpo-Mir-305-P6  Lpo-Mir-305-P7  Lpo-Mir-305-P8  Tca-Mir-305  Tur-Mir-305 
Node of Origin (locus) Cryptovermes
Node of Origin (family) Cryptovermes
Genome context
(GCF_000671375.1_CSC)		 NW_019384322.1: 387014-387072 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-305)		 Mir-275 NW_019384322.1: 384393-384455 [+] Ensembl
Mir-305 NW_019384322.1: 387014-387072 [+] Ensembl
Seed UUGUACU
Precursor
(pre-Mir +30nt flank)		 
AUGAUUGUCACCUUCGCCCGCCACCAGUUCUUUGUACUUCAUUAGGUGCUCUGGUGUGUGGGAUCCAGGCAUCUCAUGGAGUGCAAAUGAUAGGUGGUUGAUUUACAACGUUGGAUUAU
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Structure
        10          20        30        40        50         
AUGAUUGUCACCUUCGCCC--|     A   C            U      U    UGUG 
                     GCCACC GUU UUUGUACUUCAU AGGUGC CUGG    U
                     UGGUGG UAG AAACGUGAGGUA UCUACG GACC    G
UAUUAGGUUGCAACAUUUAGU^     A   U            C      -    UAGG 
       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Mir-305_5p
mirBase accessionNone
Sequence 
0- UUUGUACUUCAUUAGGUGCUCUGG -24
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Star sequence

Csc-Mir-305_3p*
mirBase accessionNone
Sequence 
36- AGGCAUCUCAUGGAGUGCAAAUG -59
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