MirGeneDB 3.0
MirGeneDB ID

Esc-Mir-1994-P1

Family name MIR-1994 (all species)
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues Esc-Mir-1994-P2 
Orthologues Agr-Mir-1994-P1  Cte-Mir-1994  Dgr-Mir-1994  Eba-Mir-1994-P1  Efe-Mir-1994  Hru-Mir-1994-P1  Lan-Mir-1994-o1a  Lan-Mir-1994-o1b  Lgi-Mir-1994-P1  Lhy-Mir-1994-P1  Llo-Mir-1994  Mgi-Mir-1994-P1  Mom-Mir-1994-P1  Npo-Mir-1994-P1  Obi-Mir-1994-P1  Ovu-Mir-1994-P1  Pve-Mir-1994-P1  Rph-Mir-1994-P1  War-Mir-1994-P1 
Node of Origin (locus) Mollusca
Node of Origin (family) Lophotrochozoa
Genome context
(esc-GCA_024364805.1_ASM2436480v1)		 CM044488.1: 115526630-115526692 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1994-P1)		 Mir-1994-P2 CM044488.1: 115520475-115520533 [-] Ensembl
Mir-1994-P1 CM044488.1: 115526630-115526692 [-] Ensembl
Seed GAGACAG
Precursor
(pre-Mir +30nt flank)		 
CAAUAAUUCAACGGAUACAGCCUCAUACCAAGGGCGGUUACUCUGUUCUGCUUGUUUGAACUUUACCCUCAUGAGACAGUGUGUCCUCCCUUGGAAUGGGGUUUUUUGAAGCAGCAGCGGCAG
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Structure
        10          20        30        40        50        60  
CAAUAAUUCAACGGAUAC--|       A       C  U   U    U  GCU  UUUGAAC 
                    AGCCUCAU CCAAGGG GG UAC CUGU CU   UG       \
                    UUGGGGUA GGUUCCC CC GUG GACA GA   AC       U
GACGGCGACGACGAAGUUUU^       A       U  U   U    -  GU-  UCCCAUU 
 120       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
Li
Star sequence

Esc-Mir-1994-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGGCGGUUACUCUGUUCUGCUUG -24
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Mature sequence

Esc-Mir-1994-P1_3p
mirBase accessionNone
Sequence 
41- UGAGACAGUGUGUCCUCCCUUG -63
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