MirGeneDB 3.0
MirGeneDB ID

Agr-Mir-1994-P1

Family name MIR-1994 (all species)
Species West Indian fuzzy chiton (Acanthopleura granulata )
MiRBase ID
Paralogues Agr-Mir-1994-P2 
Orthologues Cte-Mir-1994  Dgr-Mir-1994  Eba-Mir-1994-P1  Efe-Mir-1994  Esc-Mir-1994-P1  Hru-Mir-1994-P1  Lan-Mir-1994-o1a  Lan-Mir-1994-o1b  Lgi-Mir-1994-P1  Lhy-Mir-1994-P1  Llo-Mir-1994  Mgi-Mir-1994-P1  Mom-Mir-1994-P1  Npo-Mir-1994-P1  Obi-Mir-1994-P1  Ovu-Mir-1994-P1  Pve-Mir-1994-P1  Rph-Mir-1994-P1  War-Mir-1994-P1 
Node of Origin (locus) Mollusca
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_016165875.1_ASM1616587v1_Acanthopleura_granulata)		 JABBOT010000080.1: 3346644-3346707 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1994-P1)		 Mir-1994-P2 JABBOT010000080.1: 3346352-3346408 [-] Ensembl
Mir-1994-P1 JABBOT010000080.1: 3346644-3346707 [-] Ensembl
Seed GAGACAG
Precursor
(pre-Mir +30nt flank)		 
GUCACUAUCACGAGACAACGGCUUAUAACACGGGAGGUAACUCUUGUCUGCAUGUCUCCGCUCGGCCCCUCAUGAGACAGUGUGUCCUCCCUUGCUACAAGUCGGCCACCUAACACUUCCCGUC
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Structure
        10          20        30        40        50        60  
GUCACUAUCACGAGACAA--|     A  A  C      UA  U  U    G    UCUCCGC 
                    CGGCUU UA CA GGGAGG  AC CU GUCU CAUG       U
                    GCUGAA AU GU CCCUCC  UG GA CAGA GUAC       C
CUGCCCUUCACAAUCCACCG^     C  C  U      UG  U  -    -    UCCCCGG 
  120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To
Star sequence

Agr-Mir-1994-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- CGGGAGGUAACUCUUGUCUGCAUG -24
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Mature sequence

Agr-Mir-1994-P1_3p
mirBase accessionNone
Sequence 
42- UGAGACAGUGUGUCCUCCCUUG -64
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