MirGeneDB 3.0
MirGeneDB ID

Agr-Mir-1994-P2

Family name MIR-1994 (all species)
Species West Indian fuzzy chiton (Acanthopleura granulata )
MiRBase ID
Paralogues Agr-Mir-1994-P1 
Orthologues Cte-Mir-1994  Dgr-Mir-1994  Eba-Mir-1994-P2  Efe-Mir-1994  Esc-Mir-1994-P2  Hru-Mir-1994-P2  Lan-Mir-1994-o2a  Lan-Mir-1994-o2b  Lgi-Mir-1994-P2  Llo-Mir-1994  Mgi-Mir-1994-P2  Mom-Mir-1994-P2  Npo-Mir-1994-P2  Obi-Mir-1994-P2  Ovu-Mir-1994-P2  Pve-Mir-1994-P2a  Pve-Mir-1994-P2b  Rph-Mir-1994-P2  War-Mir-1994-P2 
Node of Origin (locus) Mollusca
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_016165875.1_ASM1616587v1_Acanthopleura_granulata)		 JABBOT010000080.1: 3346352-3346408 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1994-P2)		 Mir-1994-P2 JABBOT010000080.1: 3346352-3346408 [-] Ensembl
Mir-1994-P1 JABBOT010000080.1: 3346644-3346707 [-] Ensembl
Seed GAGACAG
Precursor
(pre-Mir +30nt flank)		 
AGAAGUCGGGAUAUUGUAGCCGUCCUUCUCCGGGUCGACCUGCUGUCUGUACAACCCUGUGUGUGUGAGACAGUGCGUCCUCCCUCAGAGCGAUUGGUCGAUAUCAUCCAGAUCACC
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Structure
        10         20         30        40        50        
AGAAGUCGGGAUAUUGUA-   -|  C    CC   UC   C        GUACAACCC 
                   GCC GUC UUCU  GGG  GAC UGCUGUCU         \
                   UGG UAG GAGA  CCC  CUG GUGACAGA         U
CCACUAGACCUACUAUAGC   U^  C    CU   UC   C        GUGUGUGUG 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Agr-Mir-1994-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- CGGGUCGACCUGCUGUCUGUA -21
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Mature sequence

Agr-Mir-1994-P2_3p
mirBase accessionNone
Sequence 
35- UGAGACAGUGCGUCCUCCCUCA -57
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