MirGeneDB 3.0
MirGeneDB ID

Esc-Mir-1994-P2

Family name MIR-1994 (all species)
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues Esc-Mir-1994-P1 
Orthologues Agr-Mir-1994-P2  Cte-Mir-1994  Dgr-Mir-1994  Eba-Mir-1994-P2  Efe-Mir-1994  Hru-Mir-1994-P2  Lan-Mir-1994-o2a  Lan-Mir-1994-o2b  Lgi-Mir-1994-P2  Llo-Mir-1994  Mgi-Mir-1994-P2  Mom-Mir-1994-P2  Npo-Mir-1994-P2  Obi-Mir-1994-P2  Ovu-Mir-1994-P2  Pve-Mir-1994-P2a  Pve-Mir-1994-P2b  Rph-Mir-1994-P2  War-Mir-1994-P2 
Node of Origin (locus) Mollusca
Node of Origin (family) Lophotrochozoa
Genome context
(esc-GCA_024364805.1_ASM2436480v1)		 CM044488.1: 115520475-115520533 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1994-P2)		 Mir-1994-P2 CM044488.1: 115520475-115520533 [-] Ensembl
Mir-1994-P1 CM044488.1: 115526630-115526692 [-] Ensembl
Seed GAGACAG
Precursor
(pre-Mir +30nt flank)		 
UCAUCACAGGAAUUCAAGGCUAAAAUUCUCAGGUAGUACAAACUGUCUGCACGUUUGCAUUCGACUGUGAGACAGUGUGUCCUCCCUCAGAAGUAAUCAUGGCCAAUGCCGUCAUUGGA
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Structure
        10        20          30        40        50         
UCAUCACAGGAAUUCAAGGCUAAAA--|   C   U  U   A       G    UUUGC 
                           UUCU AGG AG ACA ACUGUCU CACG     A
                           AAGA UCC UC UGU UGACAGA GUGU     U
AGGUUACUGCCGUAACCGGUACUAAUG^   C   C  C   G       -    CAGCU 
       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Li
Star sequence

Esc-Mir-1994-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGUAGUACAAACUGUCUGCACG -23
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Mature sequence

Esc-Mir-1994-P2_3p
mirBase accessionNone
Sequence 
37- UGAGACAGUGUGUCCUCCCUCA -59
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