MirGeneDB 3.0
MirGeneDB ID

Ovu-Mir-1994-P1

Family name MIR-1994 (all species)
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues Ovu-Mir-1994-P2 
Orthologues Agr-Mir-1994-P1  Cte-Mir-1994  Dgr-Mir-1994  Eba-Mir-1994-P1  Efe-Mir-1994  Esc-Mir-1994-P1  Hru-Mir-1994-P1  Lan-Mir-1994-o1a  Lan-Mir-1994-o1b  Lgi-Mir-1994-P1  Lhy-Mir-1994-P1  Llo-Mir-1994  Mgi-Mir-1994-P1  Mom-Mir-1994-P1  Npo-Mir-1994-P1  Obi-Mir-1994-P1  Pve-Mir-1994-P1  Rph-Mir-1994-P1  War-Mir-1994-P1 
Node of Origin (locus) Mollusca
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_003957725.1_ASM395772v1_OVU)		 RXHP01025550.1: 105972-106034 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-1994-P1)		 Mir-1994-P1 RXHP01025550.1: 105972-106034 [+] Ensembl
Mir-1994-P2 RXHP01025550.1: 111143-111201 [+] Ensembl
Seed GAGACAG
Precursor
(pre-Mir +30nt flank)		 
CAAAAAUAAUUCGACAAUGACCAUAUGCUAAGAGUGGACACUCUGUUCUACAUGUUGAAAAGUACUGACCAUGAGACAGUGUGUCCUCCCUUGGCAGGGGUCAAAUUGCUGCUGCCCAAAGAU
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Structure
        10           20        30        40        50        60  
CAAAAAUAAUUCGACAA---|    AUA       AGU      U    U  A    UUGAAAA 
                    UGACC   UGCUAAG   GGACAC CUGU CU CAUG       \
                    ACUGG   ACGGUUC   CCUGUG GACA GA GUAC       G
UAGAAACCCGUCGUCGUUAA^    GG-       CCU      U    -  -    CAGUCAU 
 120       110       100         90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ax Ce Fr He In Op Op Pe Po Re Sk St Su Su Te Ve Vi Wh
Star sequence

Ovu-Mir-1994-P1_5p*
mirBase accessionNone
Sequence 
0- AGAGUGGACACUCUGUUCUACAUG -24
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Mature sequence

Ovu-Mir-1994-P1_3p
mirBase accessionNone
Sequence 
41- UGAGACAGUGUGUCCUCCCUUG -63
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