MirGeneDB 2.1

MirGeneDB ID

Ebu-Mir-455-v1

Family name MIR-455 (all species)
Seed AUGUGCC
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-455-v2 
Orthologues Aca-Mir-455  Ami-Mir-455  Bta-Mir-455  Cfa-Mir-455  Cli-Mir-455  Cmi-Mir-455  Cpi-Mir-455  Cpo-Mir-455  Dno-Mir-455  Ete-Mir-455  Gga-Mir-455  Gja-Mir-455  Hsa-Mir-455  Lch-Mir-455  Loc-Mir-455  Mdo-Mir-455  Mml-Mir-455  Mmu-Mir-455  Mun-Mir-455  Oan-Mir-455  Ocu-Mir-455  Pbv-Mir-455  Pma-Mir-455  Rno-Mir-455  Sha-Mir-455  Spt-Mir-455  Sto-Mir-455  Tgu-Mir-455  Xtr-Mir-455 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)
FYBX02009160.1: 1836436-1836493 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCAUUGCCCUCUUGUACCAGUUGUGGUUGUAUGUGCCUGUGGACCACAUCGUAGCUGUGGUCACCAUGCAGUCCGUGGGCAUAUACACCUACGGCUGGCUCUGCGGGGCCGAGACAA
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Structure
        10          20        30        40        50        
AGCAUUGCCCUCUUGUA--|         U          UG     CA   C  AGCU 
                   CCAGUUGUGG UGUAUGUGCC  UGGAC  CAU GU    G
                   GGUCGGCAUC ACAUAUACGG  GCCUG  GUA CA    U
AACAGAGCCGGGGCGUCUC^         C          GU     AC   C  CUGG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Mature sequence

Ebu-Mir-455-v1_5p

mirBase accessionNone
Sequence
0- UAUGUGCCUGUGGACCACAUCGU -23
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Star sequence

Ebu-Mir-455-v1_3p* (predicted)

mirBase accessionNone
Sequence
35- CAUGCAGUCCGUGGGCAUAUACA -58
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