MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-455

Family name MIR-455 (all species)
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-455-v1  Ami-Mir-455-v1  Bta-Mir-455-v1  Cfa-Mir-455-v1  Cja-Mir-455-v1  Cli-Mir-455-v1  Cmi-Mir-455-v1  Cpi-Mir-455-v1  Cpo-Mir-455-v1  Dno-Mir-455-v1  Dre-Mir-455-P1-v1  Dre-Mir-455-P2-v1  Ebu-Mir-455-v1  Eca-Mir-455-v1  Ete-Mir-455-v1  Gga-Mir-455-v1  Gmo-Mir-455-P1-v1  Gmo-Mir-455-P2-v1  Hsa-Mir-455-v1  Laf-Mir-455-v1  Lch-Mir-455  Loc-Mir-455-v1  Mal-Mir-455-P1-v1  Mal-Mir-455-P2-v1  Mdo-Mir-455-v1  Mml-Mir-455-v1  Mmr-Mir-455-v1  Mmu-Mir-455-v1  Mun-Mir-455  Oan-Mir-455-v1  Ocu-Mir-455-v1  Pab-Mir-455-v1  Pbv-Mir-455  Pma-Mir-455  Rno-Mir-455-v1  Sha-Mir-455-v1  Spt-Mir-455  Sto-Mir-455-v1  Tgu-Mir-455-v1  Tni-Mir-455-P1-v1  Tni-Mir-455-P2-v1  Xla-Mir-455-P3  Xla-Mir-455-P4  Xtr-Mir-455 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015172006.1: 1527647-1527704 [-]
Seed AUGUGCC
Precursor
(pre-Mir +30nt flank)		 
CCGGAGUCCUCAUGAUCCCUGGUGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGUUUAUUUCAUCUCGGCUG
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Structure
        10          20        30        40        50        
CCGGAGUCCUCAUGAUC-  -|  U UG  G          U      A   C UGGAA 
                  CC UGG G  AG GUAUGUGCCC UGGACU CAU G     G
                  GG ACU C  UC CAUAUACGGG ACCUGA GUA C     C
GUCGGCUCUACUUUAUUU  A^  C GU  A          U      C   C ACGAC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To
Mature sequence

Gja-Mir-455_5p
mirBase accessionNone
Sequence 
0- UAUGUGCCCUUGGACUACAUCG -22
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Star sequence

Gja-Mir-455_3p*
mirBase accessionNone
Sequence 
36- AUGCAGUCCAUGGGCAUAUACA -58
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