Mir-455-P4

MirGeneDB ID

Xla-Mir-455-P4

Family name

MIR-455 (all species)

Species

African clawed frog (Xenopus laevis)

MiRBase ID

xla-mir-455

Paralogues

Xla-Mir-455-P3

Orthologues

Gja-Mir-455 Lch-Mir-455 Mun-Mir-455 Pbv-Mir-455 Pma-Mir-455 Spt-Mir-455 Xtr-Mir-455

Node of Origin (locus)

X. laevis

Node of Origin (family)

Vertebrata

Genome context
(GCF_001663975.1_XLA_v2)

NW_016694861.1: 369971-370028 [-] UCSC Ensembl

Seed

AUGUGCC

Precursor
(pre-Mir +30nt flank)

CAUAGAAUGCCGUGCUCCCUGGUGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGUUUAUUUCAUCACGGAGA

Get precursor sequence

Structure

        10          20        30        40        50        
CAUAGAAUGCCGUGCUC-  -|  U UG  G          U      A   C UGGAA 
                  CC UGG G  AG GUAUGUGCCC UGGACU CAU G     G
                  GG ACU C  UC CAUAUACGGG ACCUGA GUA C     C
AGAGGCACUACUUUAUUU  A^  C GU  A          U      C   C ACGAC 
      110       100        90        80        70        60