MirGeneDB 2.1
MirGeneDB ID

Xla-Mir-455-P4

Family name MIR-455 (all species)
Seed AUGUGCC
Species African clawed frog (Xenopus laevis)
MiRBase ID xla-mir-455
Paralogues Xla-Mir-455-P3 
Orthologues Aca-Mir-455  Ami-Mir-455  Bta-Mir-455  Cfa-Mir-455  Cli-Mir-455  Cmi-Mir-455  Cpi-Mir-455  Cpo-Mir-455  Dno-Mir-455  Ete-Mir-455  Gga-Mir-455  Gja-Mir-455  Hsa-Mir-455  Lch-Mir-455  Loc-Mir-455  Mdo-Mir-455  Mml-Mir-455  Mmu-Mir-455  Mun-Mir-455  Oan-Mir-455  Ocu-Mir-455  Pbv-Mir-455  Pma-Mir-455  Rno-Mir-455  Sha-Mir-455  Spt-Mir-455  Sto-Mir-455  Tgu-Mir-455  Xtr-Mir-455 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NW_016694861.1: 369971-370028 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUAGAAUGCCGUGCUCCCUGGUGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGUUUAUUUCAUCACGGAGA
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Structure
        10          20        30        40        50        
CAUAGAAUGCCGUGCUC-  -|  U UG  G          U      A   C UGGAA 
                  CC UGG G  AG GUAUGUGCCC UGGACU CAU G     G
                  GG ACU C  UC CAUAUACGGG ACCUGA GUA C     C
AGAGGCACUACUUUAUUU  A^  C GU  A          U      C   C ACGAC 
      110       100        90        80        70        60
Deep sequencing
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CommentThere are mutliple Dicer cuts on the 3p arm and a second Drosha cut -1 on both arms.
3' NTU No
MotifsNo
Tissue expression
-   +
Eg He Re St St St St
Mature sequence

Xla-Mir-455-P4_5p
mirBase accessionMIMAT0046605
Sequence 
0- UAUGUGCCCUUGGACUACAUCG -22
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Star sequence

Xla-Mir-455-P4_3p*
mirBase accessionMIMAT0046606
Sequence 
36- AUGCAGUCCAUGGGCAUAUACA -58
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