MirGeneDB 2.1
MirGeneDB ID

Xtr-Mir-455

Family name MIR-455 (all species)
Seed AUGUGCC
Species Tropical clawed frog (Xenopus tropicalis)
MiRBase ID xtr-mir-455
Paralogues
Orthologues Aca-Mir-455  Ami-Mir-455  Bta-Mir-455  Cfa-Mir-455  Cli-Mir-455  Cmi-Mir-455  Cpi-Mir-455  Cpo-Mir-455  Dno-Mir-455  Dre-Mir-455-P1  Dre-Mir-455-P2  Ebu-Mir-455-v1  Ebu-Mir-455-v2  Ete-Mir-455  Gga-Mir-455  Gja-Mir-455  Gmo-Mir-455-P1  Gmo-Mir-455-P2  Hsa-Mir-455  Lch-Mir-455  Loc-Mir-455  Mal-Mir-455-P1  Mal-Mir-455-P2  Mdo-Mir-455  Mml-Mir-455  Mmu-Mir-455  Mun-Mir-455  Oan-Mir-455  Ocu-Mir-455  Pbv-Mir-455  Pma-Mir-455  Rno-Mir-455  Sha-Mir-455  Spt-Mir-455  Sto-Mir-455  Tgu-Mir-455  Tni-Mir-455-P1  Tni-Mir-455-P2  Xla-Mir-455-P3  Xla-Mir-455-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(xenTro9_add)		 chr8: 2703743-2703800 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUAGAAUGCCAUGCUCCCUGGCGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGUUUAUUUCAUCACGGAGA
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Structure
        10          20        30        40        50        
CAUAGAAUGCCAUGCUC-  -|  C UG  G          U      A   C UGGAA 
                  CC UGG G  AG GUAUGUGCCC UGGACU CAU G     G
                  GG ACU C  UC CAUAUACGGG ACCUGA GUA C     C
AGAGGCACUACUUUAUUU  A^  C GU  A          U      C   C ACGAC 
      110       100        90        80        70        60
Deep sequencing
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CommentThere are mutliple Dicer cuts on the 3p arm.
3' NTU No
MotifsNo
Tissue expression
-   +
Br Em Em Em Em He
Mature sequence

Xtr-Mir-455_5p
mirBase accessionMIMAT0003641
Sequence 
0- UAUGUGCCCUUGGACUACAUCG -22
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Proposed targets TargetScanVert: xtr-miR-455
Star sequence

Xtr-Mir-455_3p*
mirBase accessionNone
Sequence 
36- AUGCAGUCCAUGGGCAUAUACA -58
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