MirGeneDB 2.1
MirGeneDB ID

Pma-Mir-455

Family name MIR-455 (all species)
Seed GCAGUCC
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-455  Ami-Mir-455  Bta-Mir-455  Cfa-Mir-455  Cli-Mir-455  Cmi-Mir-455  Cpi-Mir-455  Cpo-Mir-455  Dno-Mir-455  Dre-Mir-455-P1  Dre-Mir-455-P2  Ebu-Mir-455-v1  Ebu-Mir-455-v2  Ete-Mir-455  Gga-Mir-455  Gja-Mir-455  Gmo-Mir-455-P1  Gmo-Mir-455-P2  Hsa-Mir-455  Lch-Mir-455  Loc-Mir-455  Mal-Mir-455-P1  Mal-Mir-455-P2  Mdo-Mir-455  Mml-Mir-455  Mmu-Mir-455  Mun-Mir-455  Oan-Mir-455  Ocu-Mir-455  Pbv-Mir-455  Rno-Mir-455  Sha-Mir-455  Spt-Mir-455  Sto-Mir-455  Tgu-Mir-455  Tni-Mir-455-P1  Tni-Mir-455-P2  Xla-Mir-455-P3  Xla-Mir-455-P4  Xtr-Mir-455 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046127.1: 1877745-1877804 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCGGUGAGCAGGGCUCGGCUGGCGGUGAGAGUAUGUGCCCCUGGACCACAUCGUACAUGUCCUCACCAUGCAGUCCGUGGGCAUAUACACUCACUGCCAGCAUCGUCAUCAACAUCGUCA
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Structure
        10          20        30        40        50         
GCGGUGAGCAGGGCUCG--|           A          C     CA   CGUACAU 
                   GCUGGCGGUGAG GUAUGUGCCC UGGAC  CAU       G
                   CGACCGUCACUC CAUAUACGGG GCCUG  GUA       U
ACUGCUACAACUACUGCUA^           A          U     AC   CCACUCC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Gi Gu He Ki La Li Mo Mu Sk
Star sequence

Pma-Mir-455_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUAUGUGCCCCUGGACCACAUC -22
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Mature sequence

Pma-Mir-455_3p
mirBase accessionNone
Sequence 
38- UGCAGUCCGUGGGCAUAUACAC -60
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