MirGeneDB 2.1
MirGeneDB ID

Dre-Mir-19-P2d

Family name MIR-19 (all species)
Seed GUGCAAA
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-19d
Paralogues Dre-Mir-19-P1a1  Dre-Mir-19-P1a2  Dre-Mir-19-P2a1  Dre-Mir-19-P2a2  Dre-Mir-19-P2c 
Orthologues Cmi-Mir-19-P2d  Gmo-Mir-19-P2d  Lch-Mir-19-P2d  Loc-Mir-19-P2d  Mal-Mir-19-P2d  Mun-Mir-19-P2d  Tni-Mir-19-P2d 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr14: 100674-100734 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-19-P2d)		 Mir-17-P4d chr14: 100511-100568 [+] UCSC Ensembl
Mir-19-P2d chr14: 100674-100734 [+] UCSC Ensembl
Mir-92-P2d chr14: 100779-100838 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGUCGCCGUGACGACUGUUGUGUGACGGUCAGCUUUGCGGGGUGGGCAGUCAGCCUCCGUGUGGCCGCUGUGCAAACCCAUGCAAAACUGAGCGCUGCGCUACGCUACACUGAUGCUACGC
Get precursor sequence
Structure
        10          20        30         40        50        60
UGUCGCCGUGACGACUGUU--    GA  G    C      -|   GG   GU    CUCCG 
                     GUGU  CG UCAG UUUGCG GGGU  GCA  CAGC     U
                     CGCG  GC AGUC AAACGU CCCA  CGU  GUCG     G
CGCAUCGUAGUCACAUCGCAU    UC  G    A      A^   AA   --    CCGGU 
 .       110       100        90        80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-19-P2d_5p*
mirBase accessionMIMAT0031941
Sequence 
0- AGCUUUGCGGGGUGGGCAGUCAGC -24
Get sequence
Mature sequence

Dre-Mir-19-P2d_3p
mirBase accessionMIMAT0001785
Sequence 
38- UGUGCAAACCCAUGCAAAACUGA -61
Get sequence
Proposed targets TargetScanFish: dre-miR-19d