MirGeneDB

MirGeneDB ID

Dno-Let-7-P2a2

Family name LET-7 (all species)
Seed GAGGUAG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID
Paralogues Dno-Let-7-P1a  Dno-Let-7-P1c  Dno-Let-7-P2a1  Dno-Let-7-P2a3  Dno-Let-7-P2b1  Dno-Let-7-P2b2  Dno-Let-7-P2b3  Dno-Let-7-P2c1  Dno-Let-7-P2c2  Dno-Let-7-P2c3 
Orthologues Aae-Let-7  Aca-Let-7-P2a2  Ami-Let-7-P2a2  Bge-Let-7  Bta-Let-7-P2a2  Cfa-Let-7-P2a2  Cgi-Let-7  Cli-Let-7-P2a2  Cpi-Let-7-P2a2  Cpo-Let-7-P2a2  Cte-Let-7  Dan-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dre-Let-7-P2a2  Ete-Let-7-P2a2  Gga-Let-7-P2a2  Hme-Let-7  Hsa-Let-7-P2a2  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Mdo-Let-7-P2a2  Mml-Let-7-P2a2  Mmu-Let-7-P2a2  Oan-Let-7-P2a2  Ocu-Let-7-P2a2  Pfl-Let-7  Pmi-Let-7  Rno-Let-7-P2a2  Sha-Let-7-P2a2  Sko-Let-7  Spu-Let-7  Sto-Let-7-P2a2  Tca-Let-7  Tgu-Let-7-P2a2  Xtr-Let-7-P2a2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(dasNov3)
568349984_name_G734P619790RC6_T0_mate_568356458: 382-448 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAGACCGGCAGGACGAGCGCCCUUCGGGGUGAGGUAGUAGGUUGUAUAGUUUGGGGCCUGCCCUGCUGUGGAUAACUAUACAAUCUACUGUCUUUCCUGAAGUGGCCGUGACCUCGGCGCUGGACC
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Structure
        10         20         30        40        50        60   
CAAGACCGGCAGGACGAGC-   -|       U   GU                UGGGGCCUGC 
                    GCC CUUCGGGG GAG  AGUAGGUUGUAUAGUU          C
                    CGG GAAGUCCU UUC  UCAUCUAACAUAUCAA          C
CCAGGUCGCGGCUCCAGUGC   U^       -   UG                UAGGUGUCGU 
     120       110       100         90        80        70
Deep sequencing
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CommentNot in assembly but in trace archive.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Dno-Let-7-P2a2_5p

MirBase accessionNone
Sequence
0- UGAGGUAGUAGGUUGUAUAGUU -22
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Star sequence

Dno-Let-7-P2a2_3p*

MirBase accessionNone
Sequence
46- CUAUACAAUCUACUGUCUUUC -67
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