MirGeneDB 3.0
MirGeneDB ID

Cli-Mir-458

Family name MIR-458 (all species)
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-458
Paralogues Cli-Mir-458-as 
Orthologues Aca-Mir-458  Ami-Mir-458  Cpi-Mir-458  Dre-Mir-458  Gga-Mir-458  Gga-Mir-458-as  Gja-Mir-458  Gmo-Mir-458  Lch-Mir-458  Loc-Mir-458  Mal-Mir-458  Mun-Mir-458  Oan-Mir-458  Pbv-Mir-458  Spt-Mir-458  Tgu-Mir-458  Tni-Mir-458  Xla-Mir-458-P1  Xla-Mir-458-P2  Xtr-Mir-458 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(colLiv2)		 scaffold636: 126032-126089 [+]
Clustered miRNAs
(< 50kb from Mir-458)		 Mir-458-as scaffold636: 126030-126087 [-]
Mir-458 scaffold636: 126032-126089 [+]
Seed UAGCUCU
Precursor
(pre-Mir +30nt flank)		 
GAUGAGCCGCUGCACCGUGGUGCAGAUGGCAGCGCCAUUUCCAGAGCUAUAAACAGUCUCAUUGUCAUAGCUCUUUGAAUGGUACUGCCAUAUGUACCGGAAAACCAGCAUCUAAGCU
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Structure
        10          20        30        40        50        
GAUGAGCCGCUGCACCG--|      G       CG      CC        AAACAGU 
                   UGGUGCA AUGGCAG  CCAUUU  AGAGCUAU       C
                   GCCAUGU UACCGUC  GGUAAG  UCUCGAUA       U
UCGAAUCUACGACCAAAAG^      A       AU      UU        CUGUUAC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Li Mi Ov Pe Te To
Star sequence

Cli-Mir-458_5p*
mirBase accessionMIMAT0038649
Sequence 
0- AGCGCCAUUUCCAGAGCUAUAA -22
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Mature sequence

Cli-Mir-458_3p
mirBase accessionMIMAT0038650
Sequence 
36- AUAGCUCUUUGAAUGGUACUGC -58
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