MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-458

Family name MIR-458 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-458  Ami-Mir-458  Cli-Mir-458  Cli-Mir-458-as  Cpi-Mir-458  Dre-Mir-458  Gga-Mir-458  Gga-Mir-458-as  Gja-Mir-458  Gmo-Mir-458  Lch-Mir-458  Loc-Mir-458  Mun-Mir-458  Oan-Mir-458  Pbv-Mir-458  Spt-Mir-458  Tgu-Mir-458  Tni-Mir-458  Xla-Mir-458-P1  Xla-Mir-458-P2  Xtr-Mir-458 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884709.1: 2790586-2790644 [+] UCSC Ensembl
Seed UAGCUCU
Precursor
(pre-Mir +30nt flank)		 
GACGCAGAGACUCCAUUUGUUGCAGAUCGCAGCGCCAUUUUCAGAGCUAUAAGUGUGAAAGUUGUCAUAGCUCUUUUAAAUGGUACUGCUGUAUGCACUCAAAUGACCAUCCACCUGAA
Get precursor sequence
Structure
        10         20         30        40         50        
GACGCAGAGACUCCAUU-  U-    G  C    CG      UC-|       AAGUGUG 
                  UG  UGCA AU GCAG  CCAUUU   AGAGCUAU       A
                  AC  ACGU UG CGUC  GGUAAA   UCUCGAUA       A
AAGUCCACCUACCAGUAA  UC    A  U    AU      UUU^       CUGUUGA 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-458_5p*
mirBase accessionNone
Sequence 
0- AGCGCCAUUUUCAGAGCUAUAA -22
Get sequence
Mature sequence

Mal-Mir-458_3p
mirBase accessionNone
Sequence 
36- AUAGCUCUUUUAAAUGGUACUGC -59
Get sequence