MirGeneDB 3.0

MirGeneDB ID

Mun-Mir-458

Family name MIR-458 (all species)
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues
Orthologues Aca-Mir-458  Ami-Mir-458  Cli-Mir-458  Cli-Mir-458-as  Cpi-Mir-458  Dre-Mir-458  Gga-Mir-458  Gga-Mir-458-as  Gja-Mir-458  Gmo-Mir-458  Lch-Mir-458  Loc-Mir-458  Mal-Mir-458  Oan-Mir-458  Pbv-Mir-458  Spt-Mir-458  Tgu-Mir-458  Tni-Mir-458  Xla-Mir-458-P1  Xla-Mir-458-P2  Xtr-Mir-458 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(GCA_901765095.2_aMicUni1.2)
LR594639.1: 181940700-181940757 [+]
Seed UAGCUCU
Precursor
(pre-Mir +30nt flank)
UGACCCUGCUGUAUGAGAGGUGCCGAUGGCAGCGCCAUUUUCAGAGCUAUAAACAGGAUCAUUGUCAUAGCUCUUUGAAUGGUACUGCCCUAUGCACUGAAAAAUCAGCACGCCGUCC
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Structure
        10          20        30        40        50        
UGACCCUGCUGUAUGAGA--|    CGAU     CG      UC        AAACAGG 
                    GGUGC    GGCAG  CCAUUU  AGAGCUAU       A
                    UCACG    CCGUC  GGUAAG  UCUCGAUA       U
CCUGCCGCACGACUAAAAAG^    UAUC     AU      UU        CUGUUAC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Mun-Mir-458_5p* (predicted)

mirBase accessionNone
Sequence
0- AGCGCCAUUUUCAGAGCUAUAA -22
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Mature sequence

Mun-Mir-458_3p

mirBase accessionNone
Sequence
36- AUAGCUCUUUGAAUGGUACUGC -58
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