MirGeneDB 3.0
MirGeneDB ID

Aga-Mir-252-P2

Family name MIR-252 (all species)
Species African malaria mosquito (Anopheles gambiae)
MiRBase ID
Paralogues
Orthologues Aae-Mir-252-P2  Agr-Mir-252-P2  Bfl-Mir-252-P2  Bge-Mir-252-P2-v1  Bla-Mir-252-P2  Cbr-Mir-252-P2  Cel-Mir-252-P2  Csc-Mir-252-P2k  Csc-Mir-252-P2l-v1  Cte-Mir-252-P2  Dan-Mir-252-P2-v1  Dlo-Mir-252-P2  Dma-Mir-252-P2-v1  Dme-Mir-252-P2-v1  Dmo-Mir-252-P2-v1  Dpu-Mir-252-P2-v1  Dsi-Mir-252-P2-v1  Dya-Mir-252-P2-v1  Eba-Mir-252-P2  Gpa-Mir-252-P2  Hme-Mir-252-P2  Hru-Mir-252-P2  Isc-Mir-252-P2-v1  Lan-Mir-252-P2  Lgi-Mir-252-P2  Llo-Mir-252-P2  Lpo-Mir-252-P2c  Lpo-Mir-252-P2d  Mgi-Mir-252-P2  Mom-Mir-252-P2  Npo-Mir-252-P2  Ofu-Mir-252-P2  Pau-Mir-252-P2  Pcr-Mir-252-P2  Pdu-Mir-252-P2  Pfl-Mir-252-P2  Pmi-Mir-252-P2  Pve-Mir-252-P2  Sko-Mir-252-P2  Snu-Mir-252-P2  Spu-Mir-252-P2  Tca-Mir-252-P2  Tur-Mir-252-P2-v1  War-Mir-252-P2  Xbo-Mir-252-P2 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)		 NC_064601.1: 51332351-51332405 [-] Ensembl
Seed UAAGUAC
Precursor
(pre-Mir +30nt flank)		 
AAAAUGCCCGAAACUGAUAAGAAUUCUUUACUAAGUACUAGUGCCGCAGGAGAGAUUCUAACCCCUGCUGCCCAAGUGCUUAUCGAAGAGUUCCGCUCUCUCAACUGAAGCGCAA
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Structure
        10        20          30        40        50       
AAAAUGCCCGAAACUGAUAA--|        AC        AGU  C     AGAGAU 
                      GAAUUCUUU  UAAGUACU   GC GCAGG      \
                      CUUGAGAAG  AUUCGUGA   CG CGUCC      U
AACGCGAAGUCAACUCUCUCGC^        CU        ACC  U     CCAAUC 
   110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ab Ab He He Mi Mi Ov Ov Ov
Mature sequence

Aga-Mir-252-P2_5p
mirBase accessionNone
Sequence 
0- CUAAGUACUAGUGCCGCAGGAG -22
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Star sequence

Aga-Mir-252-P2_3p*
mirBase accessionNone
Sequence 
33- CCUGCUGCCCAAGUGCUUAUCG -55
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