MirGeneDB 3.0
52 Echinococcus granulosus microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC Eg Eg Ev Ev Ad Fe Fe Hy Hy Hy Li Li Li Mi Mi Mi Po Po Po Po Po Po Po Pr Pr Pr Sm
Egr-Novel-4 None EGR-NOVEL-4 CGGCGAA None None APAU02000084.1 320514 320585 + E. granulosus E. granulosus No 1
Egr-Novel-3 None EGR-NOVEL-3 UCGAGCA None None APAU02000319.1 8579 8837 + E. granulosus E. granulosus No 1
Egr-Novel-2 None EGR-NOVEL-2 GUAACGC None None APAU02000016.1 265656 265917 - E. granulosus E. granulosus No
Egr-Novel-1 None EGR-NOVEL-1 ACGUGGU None None APAU02000165.1 53607 53674 + E. granulosus E. granulosus No 1 1
Egr-Mir-10293 egr-mir-10293 MIR-10293 AAUUCGA MIMAT0041337 MIMAT0041338 APAU02000036.1 266799 266856 + E. granulosus E. granulosus No 1
Egr-Mir-2160-P7 egr-mir-10227d MIR-2160 GGUGCUU MIMAT0041227 MIMAT0041228 APAU02000203.1 69029 69085 + E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P6 egr-mir-10227b MIR-2160 GGAGCUU MIMAT0041193 MIMAT0041194 APAU02000041.1 46144 46200 + E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P5 egr-mir-10227e MIR-2160 GGCGCUU MIMAT0041245 MIMAT0041246 APAU02000041.1 46714 46770 + E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P4 egr-mir-10227a MIR-2160 GGCGCUU MIMAT0041179 MIMAT0041180 APAU02000041.1 52255 52311 + E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P3 egr-mir-10227c MIR-2160 GGCGCUU MIMAT0041201 MIMAT0041202 APAU02000041.1 46431 46487 + E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P2b egr-mir-10229b MIR-2160 GGCGCUU MIMAT0041199 MIMAT0041200 APAU02000041.1 53714 53776 - E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P2a egr-mir-10229a MIR-2160 GGCGCUU MIMAT0041189 MIMAT0041190 APAU02000041.1 53907 53961 - E. granulosus Platyhelminthes Unknown 1
Egr-Mir-1993 egr-mir-2162 MIR-1993 AUUAUGC MIMAT0041181 MIMAT0041182 APAU02000040.1 661472 661528 + Protostomia Protostomia No 1
Egr-Mir-1992 egr-mir-1992 MIR-1992 CAGCAGU MIMAT0041197 MIMAT0041198 APAU02000092.1 131564 131631 + Platytrochozoa Platytrochozoa No 1 1
Egr-Mir-281 egr-mir-281 MIR-281 AGGAGGG MIMAT0041187 MIMAT0041188 APAU02000006.1 1258750 1258809 - Nephrozoa Nephrozoa No
Egr-Mir-279 egr-mir-61 MIR-279 GACUAGA MIMAT0041175 MIMAT0041176 APAU02000003.1 1828878 1828952 + Protostomia Protostomia No 1
Egr-Mir-277-P9 egr-mir-277b MIR-277 AAAUGCA MIMAT0041734 MIMAT0041735 APAU02000012.1 779202 779268 + Neodermata Protostomia No 1 1
Egr-Mir-277-P8 egr-mir-277a MIR-277 AAAUGCA None MIMAT0020247 APAU02000001.1 2377323 2377401 + Tricladida + Neodermata Protostomia No 1
Egr-Mir-277-P7 egr-mir-4989 MIR-277 AAAUGCA MIMAT0037433 MIMAT0020250 APAU02000001.1 2377193 2377267 + Tricladida + Neodermata Protostomia No 1
Egr-Mir-219 egr-mir-219 MIR-219 GAUUGUC MIMAT0020246 MIMAT0037430 APAU02000015.1 1031610 1031684 - Bilateria Bilateria No 1 1
Egr-Mir-210 None MIR-210 GGCACUG None None APAU02000049.1 196435 196564 + Bilateria Bilateria No 1 1
Egr-Mir-190 egr-mir-190 MIR-190 GAUAUGU MIMAT0020245 MIMAT0037429 APAU02000055.1 250958 251022 - Bilateria Bilateria Unknown 1
Egr-Mir-184 egr-mir-184 MIR-184 GGACGGA MIMAT0020249 MIMAT0037432 APAU02000032.1 644081 644137 + Nephrozoa Nephrozoa No 1
Egr-Mir-153 egr-mir-153 MIR-153 UGCAUAG MIMAT0037428 MIMAT0020244 APAU02000047.1 276197 276270 - Bilateria Bilateria No
Egr-Mir-133 egr-mir-133 MIR-133 UGGUCCC MIMAT0041195 MIMAT0041196 APAU02000107.1 129474 129536 + Bilateria Bilateria No 1
Egr-Mir-124-o9 egr-mir-124a MIR-124 AAGGCAC MIMAT0037426 MIMAT0020240 APAU02000103.1 18246 18301 + E. granulosus Bilateria No 1
Egr-Mir-124-o8 egr-mir-124b MIR-124 AAGGCAC MIMAT0020241 MIMAT0020242 APAU02000030.1 412348 412402 - E. granulosus Bilateria No 1
Egr-Mir-96-P3 egr-mir-10247 MIR-96 AUGGCAC MIMAT0041239 MIMAT0041240 APAU02000279.1 25700 25755 + Bilateria Bilateria No
Egr-Mir-96-P1 egr-mir-96 MIR-96 UUGGCAC MIMAT0043034 MIMAT0043035 APAU02000054.1 418200 418296 + Bilateria Bilateria No 1
Egr-Mir-92-o135 egr-mir-3479b MIR-92 AUUGCAC MIMAT0041730 MIMAT0041731 APAU02000015.1 733486 733553 - E. granulosus Bilateria No 1
Egr-Mir-92-o134 egr-mir-3479a MIR-92 AUUGCAC MIMAT0041183 MIMAT0041184 APAU02000006.1 1737374 1737428 - E. granulosus Bilateria No 1
Egr-Mir-87-o28 egr-mir-87 MIR-87 UGAGCAA MIMAT0020238 MIMAT0020239 APAU02000009.1 962336 962429 - E. granulosus Protostomia No 1
Egr-Mir-71 egr-mir-71 MIR-71 GAAAGAC MIMAT0020237 MIMAT0037425 APAU02000027.1 925561 925620 + Nephrozoa Nephrozoa No 1 1
Egr-Mir-67 egr-mir-307 MIR-67 CACAACC MIMAT0041335 MIMAT0041336 APAU02000021.1 217704 217777 + Protostomia Protostomia No 1
Egr-Mir-36-o37 egr-mir-36b MIR-36 CACCGGG MIMAT0041237 MIMAT0041238 APAU02000003.1 597055 597139 + E. granulosus Protostomia Unknown 1
Egr-Mir-36-o36 egr-mir-36a MIR-36 CACCGGG MIMAT0041191 MIMAT0041192 APAU02000028.1 704590 704664 + E. granulosus Protostomia No
Egr-Mir-33 None MIR-33 UGCAUUG None None APAU02000003.1 1278320 1278380 - Bilateria Bilateria No
Egr-Mir-31 egr-mir-31 MIR-31 GGCAAGA MIMAT0041177 MIMAT0041178 APAU02000211.1 49503 49564 - Bilateria Bilateria No 1
Egr-Mir-22-P1 egr-mir-745 MIR-22 GCUGCCU MIMAT0037431 MIMAT0020248 APAU02000001.1 852884 852940 - Bilateria Bilateria No 1
Egr-Mir-12 egr-mir-10228 MIR-12 GAGUAUU MIMAT0041185 MIMAT0041186 APAU02000061.1 48094 48163 - Protostomia Protostomia Unknown 1 1
Egr-Mir-10-P3 egr-mir-125 MIR-10 CCCUGAG MIMAT0020243 MIMAT0037427 APAU02000012.1 1320792 1320866 + Bilateria Eumetazoa No
Egr-Mir-10-P1 egr-mir-10a MIR-10 ACCCUGU MIMAT0020236 MIMAT0037424 APAU02000001.1 92728 92805 + Bilateria Eumetazoa No 1 1
Egr-Mir-9 egr-mir-9 MIR-9 CUUUGGU MIMAT0020235 MIMAT0037423 APAU02000235.1 50918 50991 + Bilateria Bilateria No 1
Egr-Mir-8 egr-mir-8 MIR-8 AAUACUG MIMAT0037422 MIMAT0020234 APAU02000108.1 64342 64421 + Nephrozoa Nephrozoa No 1
Egr-Mir-7-P17 egr-mir-7b MIR-7 GGAAGAC MIMAT0043036 MIMAT0043037 APAU02000006.1 1743289 1743385 + Neodermata Bilateria No 1
Egr-Mir-7-P16 egr-mir-7 MIR-7 GGAAGAC MIMAT0020233 MIMAT0037421 APAU02000012.1 579485 579546 - Neodermata Bilateria No 1
Egr-Mir-2-o138 egr-mir-2a MIR-2 AUCACAG MIMAT0037419 MIMAT0020229 APAU02000019.1 574332 574389 + E. granulosus Protostomia No
Egr-Mir-2-o137 egr-mir-2b MIR-2 AUCACAG MIMAT0037420 MIMAT0020230 APAU02000027.1 925765 925820 + E. granulosus Protostomia No 1
Egr-Mir-2-o136 egr-mir-2c MIR-2 CACAGCC MIMAT0020231 MIMAT0020232 APAU02000027.1 925661 925716 + E. granulosus Protostomia No 1
Egr-Mir-1 egr-mir-1 MIR-1 GGAAUGU MIMAT0020228 MIMAT0020228 APAU02000107.1 117509 117581 + Bilateria Bilateria No 1
Egr-Let-7 egr-let-7 LET-7 GAGGUAG MIMAT0020227 MIMAT0037418 APAU02000098.1 276833 276889 + Bilateria Bilateria No 1
Egr-Bantam-P27 egr-bantam BANTAM GAGAUCG MIMAT0041173 MIMAT0041174 APAU02000171.1 120988 121060 - Protostomia Protostomia No 1

(red - mature/co-mature, blue - star)

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