MirGeneDB 3.0
MirGeneDB ID

Egr-Mir-124-o8

Family name MIR-124 (all species)
Species Hydatid worm (Echinococcus granulosus)
MiRBase ID egr-mir-124b
Paralogues Egr-Mir-124-o9 
Orthologues Aae-Mir-124  Aga-Mir-124  Agr-Mir-124  Asu-Mir-124  Bfl-Mir-124  Bge-Mir-124  Bko-Mir-124  Bla-Mir-124  Bpl-Mir-124  Cel-Mir-124  Cin-Mir-124-P8  Cte-Mir-124  Dan-Mir-124  Dlo-Mir-124  Dma-Mir-124  Dme-Mir-124  Dmo-Mir-124  Dpu-Mir-124  Dsi-Mir-124  Dya-Mir-124  Eba-Mir-124  Esc-Mir-124  Gpa-Mir-124  Gsp-Mir-124  Hme-Mir-124  Hru-Mir-124  Isc-Mir-124  Lan-Mir-124  Lhy-Mir-124  Llo-Mir-124  Mgi-Mir-124  Mom-Mir-124  Npo-Mir-124  Obi-Mir-124  Ofu-Mir-124  Ovu-Mir-124  Pau-Mir-124  Pdu-Mir-124  Pfl-Mir-124  Pmi-Mir-124  Pve-Mir-124  Sko-Mir-124  Sma-Mir-124  Sne-Mir-124  Snu-Mir-124  Spu-Mir-124  Sro-Mir-124  Tca-Mir-124  War-Mir-124  Xbo-Mir-124 
Node of Origin (locus) E. granulosus
Node of Origin (family) Bilateria
Genome context
(GCA_000524195.1_ASM52419v1_Egranulosus)		 APAU02000030.1: 412348-412402 [-] UCSC Ensembl
Seed AAGGCAC
Precursor
(pre-Mir +30nt flank)		 
GGUGGUUAAGAGAGACGCUGUGUGAAUUUGGUAUUCUACGCGAUGUCUUGGUACGAGUUGACACUAAGGCACGCGGUGAAUACCAAGGUCCUGUCUUUGAACGACGACUUAUCUC
Get precursor sequence
Structure
        10        20          30        40        50       
GGUGGUUAAGAGAGACGCUGUGU--| A          UA    A         ACGA 
                         GA UUUGGUAUUC  CGCG UGUCUUGGU    G
                         CU GAACCAUAAG  GCGC ACGGAAUCA    U
CUCUAUUCAGCAGCAAGUUUCUGUC^ G          UG    -         CAGU 
   110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Eg Eg Ev Ev Ad Fe Fe Hy Hy Hy Li Li Li Mi Mi Mi Po Po Po Po Po Po Po Pr Pr Pr Sm
Star sequence

Egr-Mir-124-o8_5p*
mirBase accessionMIMAT0020241
Sequence 
0- GUAUUCUACGCGAUGUCUUGGU -22
Get sequence
Mature sequence

Egr-Mir-124-o8_3p
mirBase accessionMIMAT0020242
Sequence 
34- UAAGGCACGCGGUGAAUACCA -55
Get sequence