MirGeneDB 3.0

22 microRNA genes with node of origin E. granulosus
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Egr-Mir-2-o136 egr-mir-2c MIR-2 CACAGCC MIMAT0020231 MIMAT0020232 APAU02000027.1 925661 925716 + E. granulosus Protostomia No 1
Egr-Mir-2-o137 egr-mir-2b MIR-2 AUCACAG MIMAT0037420 MIMAT0020230 APAU02000027.1 925765 925820 + E. granulosus Protostomia No 1
Egr-Mir-2-o138 egr-mir-2a MIR-2 AUCACAG MIMAT0037419 MIMAT0020229 APAU02000019.1 574332 574389 + E. granulosus Protostomia No
Egr-Mir-36-o36 egr-mir-36a MIR-36 CACCGGG MIMAT0041191 MIMAT0041192 APAU02000028.1 704590 704664 + E. granulosus Protostomia No
Egr-Mir-36-o37 egr-mir-36b MIR-36 CACCGGG MIMAT0041237 MIMAT0041238 APAU02000003.1 597055 597139 + E. granulosus Protostomia Unknown 1
Egr-Mir-87-o28 egr-mir-87 MIR-87 UGAGCAA MIMAT0020238 MIMAT0020239 APAU02000009.1 962336 962429 - E. granulosus Protostomia No 1
Egr-Mir-92-o134 egr-mir-3479a MIR-92 AUUGCAC MIMAT0041183 MIMAT0041184 APAU02000006.1 1737374 1737428 - E. granulosus Bilateria No 1
Egr-Mir-92-o135 egr-mir-3479b MIR-92 AUUGCAC MIMAT0041730 MIMAT0041731 APAU02000015.1 733486 733553 - E. granulosus Bilateria No 1
Egr-Mir-124-o8 egr-mir-124b MIR-124 AAGGCAC MIMAT0020241 MIMAT0020242 APAU02000030.1 412348 412402 - E. granulosus Bilateria No 1
Egr-Mir-124-o9 egr-mir-124a MIR-124 AAGGCAC MIMAT0037426 MIMAT0020240 APAU02000103.1 18246 18301 + E. granulosus Bilateria No 1
Egr-Mir-2160-P2a egr-mir-10229a MIR-2160 GGCGCUU MIMAT0041189 MIMAT0041190 APAU02000041.1 53907 53961 - E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P2b egr-mir-10229b MIR-2160 GGCGCUU MIMAT0041199 MIMAT0041200 APAU02000041.1 53714 53776 - E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P3 egr-mir-10227c MIR-2160 GGCGCUU MIMAT0041201 MIMAT0041202 APAU02000041.1 46431 46487 + E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P4 egr-mir-10227a MIR-2160 GGCGCUU MIMAT0041179 MIMAT0041180 APAU02000041.1 52255 52311 + E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P5 egr-mir-10227e MIR-2160 GGCGCUU MIMAT0041245 MIMAT0041246 APAU02000041.1 46714 46770 + E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P6 egr-mir-10227b MIR-2160 GGAGCUU MIMAT0041193 MIMAT0041194 APAU02000041.1 46144 46200 + E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P7 egr-mir-10227d MIR-2160 GGUGCUU MIMAT0041227 MIMAT0041228 APAU02000203.1 69029 69085 + E. granulosus Platyhelminthes Unknown 1
Egr-Mir-10293 egr-mir-10293 MIR-10293 AAUUCGA MIMAT0041337 MIMAT0041338 APAU02000036.1 266799 266856 + E. granulosus E. granulosus No 1
Egr-Novel-1 None EGR-NOVEL-1 ACGUGGU None None APAU02000165.1 53607 53674 + E. granulosus E. granulosus No 1 1
Egr-Novel-2 None EGR-NOVEL-2 GUAACGC None None APAU02000016.1 265656 265917 - E. granulosus E. granulosus No
Egr-Novel-3 None EGR-NOVEL-3 UCGAGCA None None APAU02000319.1 8579 8837 + E. granulosus E. granulosus No 1
Egr-Novel-4 None EGR-NOVEL-4 CGGCGAA None None APAU02000084.1 320514 320585 + E. granulosus E. granulosus No 1

(red - mature/co-mature, blue - star)

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