MirGeneDB

MirGeneDB ID

Sto-Mir-455

Family name MIR-455 (all species)
Seed AUGUGCC
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues
Orthologues Aca-Mir-455  Ami-Mir-455  Bta-Mir-455  Cfa-Mir-455  Cli-Mir-455  Cpi-Mir-455  Cpo-Mir-455  Dno-Mir-455  Dre-Mir-455-P1  Dre-Mir-455-P2  Ete-Mir-455  Gga-Mir-455  Hsa-Mir-455  Mdo-Mir-455  Mml-Mir-455  Mmu-Mir-455  Oan-Mir-455  Ocu-Mir-455  Rno-Mir-455  Sha-Mir-455  Tgu-Mir-455  Xtr-Mir-455 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(miRNA_loci_genome)
BFAA01000216.1: 682947-683004 [+]
Precursor
(pre-Mir +30nt flank)
GCCGACGCAGCUCGAUCCCUGGUGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGCUUUGUUCAUCACUUGCA
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Structure
        10          20        30        40        50        
GCCGACGCAGCUCGAUC-  -|  U UG  G          U      A   C UGGAA 
                  CC UGG G  AG GUAUGUGCCC UGGACU CAU G     G
                  GG ACU C  UC CAUAUACGGG ACCUGA GUA C     C
ACGUUCACUACUUGUUUC  A^  C GU  A          U      C   C ACGAC 
      110       100        90        80        70        60
Deep sequencing
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CommentThere are mutliple Dicer sites on the 3p arm relative to what is annotated here.
3' NTU No
MotifsNo
Tissue expression
 +
To
Mature sequence

Sto-Mir-455_5p

MirBase accessionNone
Sequence
0- UAUGUGCCCUUGGACUACAUCG -22
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Star sequence

Sto-Mir-455_3p*

MirBase accessionNone
Sequence
36- AUGCAGUCCAUGGGCAUAUACA -58
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