MirGeneDB 3.0
MirGeneDB ID

Pbv-Mir-137-P3

Family name MIR-137 (all species)
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-137b
Paralogues Pbv-Mir-137-P1-v1  Pbv-Mir-137-P3-v1 
Orthologues Aca-Mir-137-P3-v1  Aga-Mir-137  Agr-Mir-137  Ami-Mir-137-P3-v1  Asu-Mir-137  Ava-Mir-137  Bfl-Mir-137  Bko-Mir-137  Bpl-Mir-137  Cbr-Mir-137  Cel-Mir-137  Cli-Mir-137-P3  Cpi-Mir-137-P3-v1  Cte-Mir-137  Dan-Mir-137  Dgr-Mir-137  Dma-Mir-137  Dme-Mir-137  Dmo-Mir-137  Dpu-Mir-137  Dsi-Mir-137  Dya-Mir-137  Eba-Mir-137  Ebu-Mir-137  Esc-Mir-137  Gga-Mir-137-P3-v1  Gja-Mir-137-P3  Gmo-Mir-137-P3a-v1  Gmo-Mir-137-P3b-v1  Gpa-Mir-137  Hme-Mir-137  Hru-Mir-137  Isc-Mir-137  Lan-Mir-137  Lch-Mir-137-P3  Lgi-Mir-137  Lhy-Mir-137  Llo-Mir-137  Loc-Mir-137-P3-v1  Mal-Mir-137-P3a-v1  Mal-Mir-137-P3b-v1  Mdo-Mir-137-P3-v1  Mgi-Mir-137  Mom-Mir-137  Mun-Mir-137-P3  Neu-Mir-137-P3  Oan-Mir-137-P3-v1  Obi-Mir-137  Ofu-Mir-137  Pau-Mir-137  Pca-Mir-137  Pdu-Mir-137  Pma-Mir-137-o3  Pve-Mir-137  Rph-Mir-137  Sha-Mir-137-P3  Sko-Mir-137  Snu-Mir-137  Spu-Mir-137  Tni-Mir-137-P3b  Tur-Mir-137  War-Mir-137  Xbo-Mir-137 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE953225.1: 228420-228480 [+]
Clustered miRNAs
(< 50kb from Mir-137-P3-v2)		 Mir-137-P3-v2 KE953225.1: 228420-228480 [+]
Mir-137-P3-v1 KE953225.1: 228421-228479 [+]
Variant

Pbv-Mir-137-P3-v2
Seed AUUGCUU
Precursor
(pre-Mir +30nt flank)		 
GGAUGGCUUGAUGACUAUGCUCCCUUCGAUGACGGGUAUUCUUGGGUAUAUAAUACAGAUGGCGUUGUUAUUGCUUGAGAAUACGCGUAGUUGAGGGGAAGUUGCUUCAGCUCAGCAGCAG
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Structure
        10         20         30        40        50        60
GGAUGGCUUGAUGACUAU-  -|         G   G       UG    U     ACAGA 
                   GC UCCCUUCGAU ACG GUAUUCU  GGUA AUAAU     U
                   UG AGGGGAGUUG UGC CAUAAGA  UCGU UAUUG     G
GACGACGACUCGACUUCGU  A^         A   G       GU    -     UUGCG 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Pbv-Mir-137-P3-v2_5p* (predicted)
mirBase accessionMIMAT0038947
Sequence 
0- GACGGGUAUUCUUGGGUAUAUAAU -24
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Mature sequence

Pbv-Mir-137-P3-v2_3p
mirBase accessionMIMAT0038948
Sequence 
38- UAUUGCUUGAGAAUACGCGUAGU -61
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Variant

Pbv-Mir-137-P3-v1
Seed UAUUGCU
Precursor
(pre-Mir +30nt flank)		 
GAUGGCUUGAUGACUAUGCUCCCUUCGAUGACGGGUAUUCUUGGGUAUAUAAUACAGAUGGCGUUGUUAUUGCUUGAGAAUACGCGUAGUUGAGGGGAAGUUGCUUCAGCUCAGCAGCA
Get precursor sequence
Structure
        10          20        30        40        50         
GAUGGCUUGAUGACUAU-  -|         G   G       UG    U      CAGA 
                  GC UCCCUUCGAU ACG GUAUUCU  GGUA AUAAUA    U
                  UG AGGGGAGUUG UGC CAUAAGA  UCGU UAUUGU    G
ACGACGACUCGACUUCGU  A^         A   G       GU    -      UGCG 
       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Pbv-Mir-137-P3-v1_5p*
mirBase accessionMIMAT0038947
Sequence 
0- ACGGGUAUUCUUGGGUAUAUAAUA -24
Get sequence
Mature sequence

Pbv-Mir-137-P3-v1_3p
mirBase accessionMIMAT0038948
Sequence 
36- UUAUUGCUUGAGAAUACGCGUAG -59
Get sequence