MirGeneDB 2.1
MirGeneDB ID

Pbv-Let-7-P1c

Family name LET-7 (all species)
Seed GAGGUAG
Species Burmese python (Python bivittatus)
MiRBase ID pbv-let-7c-1
Paralogues Pbv-Let-7-P1b  Pbv-Let-7-P1d  Pbv-Let-7-P2a1  Pbv-Let-7-P2a2  Pbv-Let-7-P2a3  Pbv-Let-7-P2a4  Pbv-Let-7-P2b1  Pbv-Let-7-P2b2  Pbv-Let-7-P2b3  Pbv-Let-7-P2b4  Pbv-Let-7-P2c1  Pbv-Let-7-P2c2  Pbv-Let-7-P2c3 
Orthologues Aae-Let-7  Aca-Let-7-P1c  Ami-Let-7-P1c  Bge-Let-7  Bpl-Let-7  Bta-Let-7-P1c  Cfa-Let-7-P1c  Cgi-Let-7  Cin-Let-7-P1  Cli-Let-7-P1c  Cpi-Let-7-P1c  Cpo-Let-7-P1c  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dno-Let-7-P1c  Dpu-Let-7  Dre-Let-7-P1c1  Dre-Let-7-P1c2  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Ete-Let-7-P1c  Gga-Let-7-P1c  Gja-Let-7-P1c  Gmo-Let-7-P1c2  Hme-Let-7  Hsa-Let-7-P1c  Isc-Let-7  Lan-Let-7  Lch-Let-7-P1c  Lgi-Let-7  Loc-Let-7-P1c  Mal-Let-7-P1c2  Mml-Let-7-P1c  Mmu-Let-7-P1c  Mun-Let-7-P1c  Npo-Let-7  Oan-Let-7-P1c  Obi-Let-7  Ocu-Let-7-P1c  Ovu-Let-7  Pfl-Let-7  Pmi-Let-7  Rno-Let-7-P1c  Sha-Let-7-P1c  Sko-Let-7  Spt-Let-7-P1c  Spu-Let-7  Sto-Let-7-P1c  Tca-Let-7  Tgu-Let-7-P1c  Xbo-Let-7  Xla-Let-7-P1c3  Xla-Let-7-P1c4  Xtr-Let-7-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE953041.1: 92848-92913 [+]
Clustered miRNAs
(< 50kb from Let-7-P1c)		 Mir-10-P2c KE953041.1: 91452-91510 [+]
Let-7-P1c KE953041.1: 92848-92913 [+]
Mir-10-P3c KE953041.1: 123184-123245 [+]
Precursor
(pre-Mir +30nt flank)
GAAGACAUUACAAGCUGUGUGCAUCCGGGUUGAGGUAGUAGGUUGUAUGGUUUAGAAUUACACCCAGGAGUUAACUGUACAACCUUCUAGCUUUCCUUGGAGCACACUUGAAUCUUCAAAGAAUUC
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Structure
        10           20        30        40        50        60  
GAAGACAUUACAAGCUG---|    A      UU   G   U             UAGAAUUAC 
                    UGUGC UCCGGG  GAG UAG AGGUUGUAUGGUU         A
                    ACACG AGGUUC  UUC AUC UCCAACAUGUCAA         C
CUUAAGAAACUUCUAAGUUC^    -      CU   G   U             UUGAGGACC 
    120       110        100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Pbv-Let-7-P1c_5p
mirBase accessionMIMAT0038798
Sequence 
0- UGAGGUAGUAGGUUGUAUGGUU -22
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Star sequence

Pbv-Let-7-P1c_3p*
mirBase accessionMIMAT0038799
Sequence 
44- CUGUACAACCUUCUAGCUUUCC -66
Get sequence