MirGeneDB ID | Oan-Mir-599 |
Family name |
MIR-599 (all species) |
Seed |
UUGAUAA |
Species |
Platypus (Ornithorhynchus anatinus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Ami-Mir-599
Bta-Mir-599
Cfa-Mir-599
Cli-Mir-599
Cpi-Mir-599
Ete-Mir-599
Hsa-Mir-599
Lch-Mir-599
Mdo-Mir-599
Mml-Mir-599
Mmu-Mir-599
Mun-Mir-599
Ocu-Mir-599
Pbv-Mir-599
Sha-Mir-599
Spt-Mir-599
Tgu-Mir-599
|
Node of Origin (locus) |
Sarcopterygii
|
Node of Origin (family) |
Sarcopterygii
|
Genome context (mOrnAna1.p.v1_plustraces) |
NC_041731.1: 62097434-62097493 [-]
|
Precursor (pre-Mir +30nt flank) |
CACGGUGAAAAACACACUGUCCUCAGUGCGUUUGAUAAGCUAACAUGAGACAGGAGCUUUUUUUCACGGUUGUGUCAGUGUAUCAGACACAAGCCUGAGCACCAAUUGAUUCCGUUAUAG
Get precursor sequence
|
Structure | 10 20 30 40 50
CACGGUGAAAAACACACU C U ----| A A GA AGGAGCUU
GU CUCAG GC GUUUGAUA GCU ACAU GAC \
CA GAGUC CG CAGACUAU UGA UGUG UUG U
GAUAUUGCCUUAGUUAAC C - AACA^ G C -- GCACUUUU
. 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Oan-Mir-599_5p (predicted) |
mirBase accession | None |
Sequence |
0- UUUGAUAAGCUAACAUGAGACAG -23
Get sequence
|
Star sequence |
Oan-Mir-599_3p* (predicted) |
mirBase accession | None |
Sequence |
38- GUUGUGUCAGUGUAUCAGACAC -60
Get sequence
|