MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-599

Family name MIR-599 (all species)
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Ami-Mir-599  Bta-Mir-599  Cfa-Mir-599  Cja-Mir-599  Cli-Mir-599  Cpi-Mir-599  Eca-Mir-599  Ete-Mir-599  Hsa-Mir-599  Lch-Mir-599  Mdo-Mir-599  Mml-Mir-599  Mmr-Mir-599  Mmu-Mir-599  Mun-Mir-599  Neu-Mir-599  Oan-Mir-599  Ocu-Mir-599  Pab-Mir-599  Pbv-Mir-599  Sha-Mir-599  Spt-Mir-599  Tgu-Mir-599 
Node of Origin (locus) Sarcopterygii
Node of Origin (family) Sarcopterygii
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010035.1: 46386921-46386979 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-599)		 Mir-599 GL010035.1: 46386921-46386979 [-] UCSC Ensembl
Mir-875 GL010035.1: 46387067-46387123 [-] UCSC Ensembl
Seed UUGAUAA
Precursor
(pre-Mir +30nt flank)		 
CAAUGUCAACUACAUGCUGUCCACAGUGUGUUUGAUAAGCUGACAUGGGACAGGAUUUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACCUGGACGACAGUCAAUUCAGUUAAAG
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Structure
        10          20         30        40        50         
CAAUGUCAACUACAUGC--      CA-|  U                 GG    GGAUUU 
                   UGUCCA   GUG GUUUGAUAAGCUGACAU  GACA      C
                   GCAGGU   UAC CAAACUAUUUGACUGUG  UUGU      U
GAAAUUGACUUAACUGACA      CCA^  C                 --    CACUUU 
       110       100        90        80          70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
- +
Wh
Mature sequence

Laf-Mir-599_5p (predicted)
mirBase accessionNone
Sequence 
0- UUUGAUAAGCUGACAUGGGACA -22
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Star sequence

Laf-Mir-599_3p* (predicted)
mirBase accessionNone
Sequence 
38- UUGUGUCAGUUUAUCAAACCC -59
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