MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-599

Family name MIR-599 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Ami-Mir-599  Bta-Mir-599  Cfa-Mir-599  Cli-Mir-599  Cpi-Mir-599  Eca-Mir-599  Ete-Mir-599  Hsa-Mir-599  Laf-Mir-599  Lch-Mir-599  Mdo-Mir-599  Mml-Mir-599  Mmr-Mir-599  Mmu-Mir-599  Mun-Mir-599  Neu-Mir-599  Oan-Mir-599  Ocu-Mir-599  Pab-Mir-599  Pbv-Mir-599  Sha-Mir-599  Spt-Mir-599  Tgu-Mir-599 
Node of Origin (locus) Sarcopterygii
Node of Origin (family) Sarcopterygii
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021930.1: 95577813-95577871 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-599)		 Mir-875 CM021930.1: 95577669-95577724 [+] UCSC Ensembl
Mir-599 CM021930.1: 95577813-95577871 [+] UCSC Ensembl
Seed UUGAUAA
Precursor
(pre-Mir +30nt flank)		 
UAAUGCCAAAGAUAUGCUGUCCACAGUGUGUUUGAUAAGCUGACAUGGGACAGGGAUUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACUUGGAUGACAGUCAAUUCAGUUAAAG
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Structure
        10          20          30        40        50         
UAAUGCCAAAGAUAUGCU--     C     --|                GG    GGGAUU 
                    GUCCA AGUGU  GUUUGAUAAGCUGACAU  GACA      C
                    UAGGU UCAUA  CAAACUAUUUGACUGUG  UUGU      U
GAAAUUGACUUAACUGACAG     -     CC^                --    CACUUU 
       110       100         90        80          70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
To
Mature sequence

Cja-Mir-599_5p
mirBase accessionNone
Sequence 
0- UUUGAUAAGCUGACAUGGGACA -22
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Star sequence

Cja-Mir-599_3p* (predicted)
mirBase accessionNone
Sequence 
38- UUGUGUCAGUUUAUCAAACCC -59
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